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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25517323 25517323 PRJEB20058_P_NODE_205161_length_252_cov_16.874346_g202337_i0 PRJEB20058 205161 252 16.874346 42.52335192 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 392 1.1899999999999997e-104   NTclustered gi|56757963|gb|AY815390.1| 6182 g202337 i0 95.219 120.349206349206 251 6 97 4 8 252 2128 2378 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 30328 392 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25612361 25612361 PRJEB20058_P_NODE_132425_length_341_cov_37.157143_g129605_i0 PRJEB20058 132425 341 37.157143 126.70585763 root 1 Root_unresolved Root_unresolved 108 6.78e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g129605 i0 100 19.2287390029326 58 0 17 0 29 86 595 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6557 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25612853 25612853 PRJEB20058_P_NODE_164513_length_294_cov_2.922747_g161690_i0 PRJEB20058 164513 294 2.922747 8.59287618 Coronacanthus 1518487 Platyhelminthes Platyhelminthes 492 1.36e-134   NTclustered gi|662488960|gb|KJ710320.1| 1518488 g161690 i0 98.913 93.8707482993197 276 2 94 1 1 275 936 661 Coronacanthus integrus isolate Ci18 18S ribosomal RNA gene, partial sequence blastn 27598 492 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Coronacanthus Coronacanthus integrus
25749982 25749982 PRJEB20058_P_NODE_22426_length_878_cov_451.603427_g20261_i0 PRJEB20058 22426 878 451.603427 3965.07808906 root 1 Root_unresolved Root_unresolved 108 1.86e-18   NTclustered gi|687789777|emb|LK829830.1| 57078 g20261 i0 100 7.43621867881549 58 0 7 0 29 86 595 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6529 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25750503 25750503 PRJEB20058_P_NODE_34298_length_717_cov_8.429878_g31729_i0 PRJEB20058 34298 717 8.429878 60.44222526 root 1 Root_unresolved Root_unresolved 108 1.51e-18   NTclustered gi|687789777|emb|LK829830.1| 57078 g31729 i0 100 8.63040446304045 58 0 8 0 632 689 538 595 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6188 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
25791608 25791608 PRJEB20058_P_NODE_36819_length_693_cov_2.740506_g34221_i0 PRJEB20058 36819 693 2.740506 18.99170658 Paracatenula sp. CEL-2 1468208 Platyhelminthes Platyhelminthes 137 1.86e-27   NTclustered gi|588313877|gb|KC869835.1| 1468208 g34221 i0 86.992 1.16017316017316 123 15 18 1 274 396 2208 2087 Paracatenula sp. CEL-2014 28S ribosomal RNA gene, partial sequence blastn 804 137 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Catenulidae Paracatenula Paracatenula sp. CEL-2014
25791912 25791912 PRJEB20058_P_NODE_42203_length_647_cov_10.781570_g39542_i0 PRJEB20058 42203 647 10.78157 69.7567579 Hymenolepis diminuta 6216 Platyhelminthes Platyhelminthes 979 0   NTclustered gi|28273293|gb|AY157181.1| 6216 g39542 i0 95.087 72.6630602782071 631 16 95 10 9 625 3216 2587 Hymenolepis diminuta 28S large subunit ribosomal RNA gene, partial sequence blastn 47013 979 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
25793647 25793647 PRJEB20058_P_NODE_74595_length_481_cov_8.019048_g71818_i0 PRJEB20058 74595 481 8.019048 38.57162088 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 614 4.769999999999999e-171   NTclustered gi|60698688|gb|AY915747.1| 6182 g71818 i0 97.493 2.25363825363825 359 9 95 0 23 381 81 439 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 1084 614 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25886126 25886126 PRJEB20058_P_NODE_27779_length_794_cov_9.215553_g25424_i0 PRJEB20058 27779 794 9.215553 73.17149082 root 1 Root_unresolved Root_unresolved 108 1.68e-18   NTclustered gi|687789777|emb|LK829830.1| 57078 g25424 i0 100 7.79345088161209 58 0 7 0 29 86 595 538 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 6188 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26335930 26335930 PRJEB20058_P_NODE_36759_length_693_cov_11.667722_g34162_i0 PRJEB20058 36759 693 11.667722 80.85731346 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 699 0   NTclustered gi|1089667270|dbj|AP017665.1| 85433 g34162 i0 87.541 83.965367965368 610 69 87 7 87 692 2119 2725 Hymenolepis microstoma mitochondrial DNA, complete genome blastn 58188 699 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
26428585 26428585 PRJEB20058_P_NODE_132383_length_341_cov_120.832143_g129563_i0 PRJEB20058 132383 341 120.832143 412.03760763 root 1 Root_unresolved Root_unresolved 108 6.78e-19   NTclustered gi|687789777|emb|LK829830.1| 57078 g129563 i0 100 35.466275659824 58 0 32 0 256 313 538 595 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0063667 blastn 12094 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26470716 26470716 PRJEB20058_P_NODE_22504_length_877_cov_5.825980_g20339_i0 PRJEB20058 22504 877 5.82598 51.0938446 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 156 6.55e-33   NTclustered gi|690710103|emb|LN267007.1| 99802 g20339 i0 85.714 3.24629418472064 147 21 17 0 584 730 1057 1203 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei, scaffold SPER_scaffold0204090 blastn 2847 156 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
26474129 26474129 PRJEB20058_P_NODE_72072_length_490_cov_8.237762_g69297_i0 PRJEB20058 72072 490 8.237762 40.3650338 Monocercus arionis 700174 Platyhelminthes Platyhelminthes 551 3.869999999999999e-152   NTclustered gi|282765738|gb|GU299827.1| 700174 g69297 i0 89.953 85.1040816326531 428 41 87 2 41 467 881 455 Monocercus arionis isolate EST_430 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 41701 551 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Dilepididae Monocercus Monocercus arionis
26475427 26475427 PRJEB20058_P_NODE_98536_length_411_cov_1.520000_g95730_i0 PRJEB20058 98536 411 1.52 6.2472 Didymorchis sp. Australia-DTJL-2 216950 Platyhelminthes Platyhelminthes 58.4 8.49e-4   NTclustered gi|28273275|gb|AY157163.1| 216950 g95730 i0 87.755 0.18978102189781 49 6 12 0 166 214 2435 2387 Didymorchis sp. Australia-DTJL-2002 28S large subunit ribosomal RNA gene, partial sequence blastn 78 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Didymorchiidae Didymorchis Didymorchis sp. Australia-DTJL-2002
26565189 26565189 PRJEB20058_P_NODE_166280_length_292_cov_1.952381_g163457_i0 PRJEB20058 166280 292 1.952381 5.70095252 Opisthokonta 33154 Platyhelminthes Platyhelminthes 204 7.06e-48   NTclustered gi|215398155|gb|EU878031.1| 79923 g163457 i0 84.615 62 208 29 71 3 26 233 1140 1344 Clonorchis sinensis beta-tubulin (TB1) mRNA, complete cds blastn 18104 204 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;