RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12776318 12776318 PRJEB20058_S_NODE_3671_length_339_cov_5.690647_g3633_i0 PRJEB20058 3671 339 5.690647 19.29129333 Minisyncoccota bacterium 2053589 Bacteria Bacteria 315 3.7e-81   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g3633 i0 85.079 18.2743362831858 315 40 92 6 23 333 441671 441360 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 6195 315 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26196588 26196588 PRJEB20058_P_NODE_175190_length_281_cov_6.822727_g172367_i0 PRJEB20058 175190 281 6.822727 19.171862869999998 Patescibacteria group bacterium UBA2163 1948796 Bacteria Bacteria 224 5.1899999999999997e-54   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g172367 i0 84.821 8.58007117437722 224 32 79 2 28 250 75822 76044 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 2411 224 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;