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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20423466 20423466 PRJEB20058_S_NODE_4997_length_274_cov_20.291080_g4959_i0 PRJEB20058 4997 274 20.29108 55.5975592 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 363 1.02e-95   NTclustered gi|2031940840|emb|OD957768.1| 5763 g4959 i0 96.364 1.89416058394161 220 8 80 0 1 220 220 1 Naegleria fowleri Karachi_NF001 strain blastn 519 363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25517703 25517703 PRJEB20058_P_NODE_214177_length_246_cov_6.886486_g211353_i0 PRJEB20058 214177 246 6.886486 16.94075556 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 56.5 0.002   NTclustered gi|2031941174|emb|OD957839.1| 5763 g211353 i0 92.308 1.67479674796748 39 3 16 0 17 55 363 401 Naegleria fowleri Karachi_NF001 strain blastn 412 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25648934 25648934 PRJEB20058_P_NODE_105442_length_394_cov_45.741742_g102634_i0 PRJEB20058 105442 394 45.741742 180.22246348 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 446 1.4799999999999999e-120   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g102634 i0 88.267 24.5456852791878 375 41 94 2 23 394 1850 2224 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9671 446 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25650204 25650204 PRJEB20058_P_NODE_13450_length_1131_cov_4.816822_g11754_i0 PRJEB20058 13450 1131 4.816822 54.47825682 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 1480 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g11754 i0 90.506 10.6728558797524 1127 98 99 8 9 1131 4262 3141 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12071 1480 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
25655217 25655217 PRJEB20058_P_NODE_31802_length_743_cov_134.868035_g29295_i0 PRJEB20058 31802 743 134.868035 1002.06950005 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 292 4.03e-74   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g29295 i0 78.71 16.0080753701211 465 79 61 15 265 720 2482 2029 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11894 292 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25786707 25786707 PRJEB20058_P_NODE_142307_length_325_cov_3.359848_g139486_i0 PRJEB20058 142307 325 3.359848 10.919506 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 470 7.11e-128   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g139486 i0 94.444 52.2492307692308 306 15 94 2 1 305 3139 2835 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16981 470 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
25790905 25790905 PRJEB20058_P_NODE_249051_length_196_cov_8.459259_g246226_i0 PRJEB20058 249051 196 8.459259 16.58014764 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 204 4.42e-48   NTclustered gi|2031942541|emb|OD958147.1| 5763 g246226 i0 90.062 2.18877551020408 161 11 82 4 36 196 7 162 Naegleria fowleri Karachi_NF001 strain blastn 429 204 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26059175 26059175 PRJEB20058_P_NODE_14973_length_1072_cov_7.070227_g13173_i0 PRJEB20058 14973 1072 7.070227 75.79283344 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 167 3.73e-36   NTclustered gi|2031942577|emb|OD958156.1| 5763 g13173 i0 78.656 0.236007462686567 253 52 24 2 18 269 1 252 Naegleria fowleri Karachi_NF001 strain blastn 253 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
26193330 26193330 PRJEB20058_P_NODE_10230_length_1303_cov_14.684380_g8769_i0 PRJEB20058 10230 1303 14.68438 191.3374714 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 664 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g8769 i0 79.286 13.8296239447429 1009 164 84 29 18 1001 3262 4250 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18020 664 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
26292559 26292559 PRJEB20058_P_NODE_124486_length_356_cov_1.732203_g121668_i0 PRJEB20058 124486 356 1.732203 6.16664268 Naegleria 5761 Heterolobosea other_Eukaryota 191 6.84e-44   NTclustered gi|2618963742|gb|OR769034.1| 5762 g121668 i0 81.2 16.7977528089888 250 36 70 7 108 356 5057 5296 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 5980 191 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26469787 26469787 PRJEB20058_P_NODE_202272_length_255_cov_0.896907_g199448_i0 PRJEB20058 202272 255 0.896907 2.28711285 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 224 4.639999999999999e-54   NTclustered gi|2031939764|emb|OD957623.1| 5763 g199448 i0 82.545 1.07843137254902 275 28 100 7 1 255 838 564 Naegleria fowleri Karachi_NF001 strain blastn 275 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;