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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25655713 25655713 PRJEB20058_P_NODE_39962_length_665_cov_1330.071192_g35148_i2 PRJEB20058 39962 665 1330.071192 8844.9734268 Lobulomycetales sp. 2058121 Fungi Fungi 758 0   NTclustered gi|2468790865|gb|OQ702874.1| 2058121 g35148 i2 87.316 101.401503759398 678 66 100 19 1 665 4587 3917 Lobulomycetales sp. isolate PSC090 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 67432 758 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
25791718 25791718 PRJEB20058_P_NODE_38683_length_676_cov_1318.775610_g35148_i1 PRJEB20058 38683 676 1318.77561 8914.9231236 Lobulomycetales sp. 2058121 Fungi Fungi 789 0   NTclustered gi|2468790865|gb|OQ702874.1| 2058121 g35148 i1 87.959 100.542899408284 681 67 100 13 1 676 4587 3917 Lobulomycetales sp. isolate PSC090 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 67967 789 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
25926105 25926105 PRJEB20058_P_NODE_219028_length_243_cov_2.076923_g216204_i0 PRJEB20058 219028 243 2.076923 5.04692289 Irineochytrium annulatum 109884 Fungi Fungi 137 5.88e-28   NTclustered gi|1866582621|gb|MT730796.1| 109884 g216204 i0 77.647 80.0534979423868 255 37 100 19 1 243 4592 4346 Irineochytrium annulatum isolate JEL0729 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19453 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
26159773 26159773 PRJEB20058_P_NODE_85965_length_444_cov_24.334204_g83176_i0 PRJEB20058 85965 444 24.334204 108.04386576 Chytridiomycetes 451435 Fungi Fungi 590 7.359999999999999e-164   NTclustered gi|1866582753|gb|MT730928.1| 64517 g83176 i0 90.971 99.7792792792793 443 33 99 3 1 443 3954 4389 Rhizophlyctis rosea isolate KP09 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44302 590 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
26335993 26335993 PRJEB20058_P_NODE_37759_length_684_cov_1246.544141_g35148_i0 PRJEB20058 37759 684 1246.544141 8526.36192444 Lobulomycetales sp. 2058121 Fungi Fungi 800 0   NTclustered gi|2468791005|gb|OQ702918.1| 2058121 g35148 i0 87.971 100.464912280702 690 67 100 14 1 684 4686 4007 Lobulomycetales sp. isolate PSC233 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 68718 800 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales     Lobulomycetales sp.
26429166 26429166 PRJEB20058_P_NODE_170567_length_286_cov_3345.493333_g167744_i0 PRJEB20058 170567 286 3345.493333 9568.11093238 Rhizophydiales 451442 Fungi Fungi 350 8.369999999999999e-92   NTclustered gi|82398198|gb|DQ273775.1| 109966 g167744 i0 88.811 100.814685314685 286 31 100 1 1 286 2143 1859 Uebelmesseromyces harderi strain JEL171 (J. E. Longcore) isolate AFTOL-ID 31 28S ribosomal RNA gene, partial sequence blastn 28833 351 0.997150997150997 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Uebelmesseromycetaceae Uebelmesseromyces Uebelmesseromyces harderi
26431401 26431401 PRJEB20058_P_NODE_81423_length_458_cov_22.430730_g78639_i0 PRJEB20058 81423 458 22.43073 102.7327434 Batrachochytrium 100474 Fungi Fungi 230 1.9099999999999994e-55   NTclustered gi|2897839259|gb|CP161931.1| 109871 g78639 i0 80.872 52.8231441048035 298 52 64 4 120 414 985571 985276 Batrachochytrium dendrobatidis strain JEL423 chromosome 9 blastn 24193 230 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
26473502 26473502 PRJEB20058_P_NODE_60176_length_540_cov_5.081420_g57417_i0 PRJEB20058 60176 540 5.08142 27.439668 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 444 7.49e-120   NTclustered gi|1026970105|ref|XM_016751496.1| 645134 g57417 i0 84.581 28.4462962962963 454 63 83 7 68 517 66 516 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L28 (SPPG_03223), mRNA blastn 15361 444 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;