RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB20058 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25516677 25516677 PRJEB20058_P_NODE_189737_length_265_cov_6.921569_g186913_i0 PRJEB20058 189737 265 6.921569 18.34215785 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 182 2.96e-41   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g186913 i0 80.738 58.0867924528302 244 37 90 10 1 238 385732 385971 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 15393 182 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
25519387 25519387 PRJEB20058_P_NODE_31849_length_743_cov_5.894428_g29341_i0 PRJEB20058 31849 743 5.894428 43.79560004 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 1081 0   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g29341 i0 93.243 303.908479138627 740 40 99 8 1 735 964220 963486 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 225804 1081 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
25650509 25650509 PRJEB20058_P_NODE_141290_length_326_cov_95.667925_g138469_i0 PRJEB20058 141290 326 95.667925 311.8774355 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 422 2.03e-113   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g138469 i0 92.256 89.3527607361963 297 23 91 0 2 298 964578 964874 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 29129 422 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
26565607 26565607 PRJEB20058_P_NODE_197096_length_258_cov_6.385787_g194272_i0 PRJEB20058 197096 258 6.385787 16.47533046 Bacteria 2 Bacteria Bacteria 300 7.6e-77   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g194272 i0 89.54 133.949612403101 239 22 92 3 21 258 964459 964223 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 34559 300 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;