RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25656580 25656580 PRJEB20058_P_NODE_55938_length_561_cov_13.030000_g53189_i0 PRJEB20058 55938 561 13.03 73.0983 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 257 1.09e-63   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g53189 i0 76.164 85.0142602495544 537 100 93 22 22 541 4163404 4162879 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 47693 257 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
25787967 25787967 PRJEB20058_P_NODE_171267_length_286_cov_1.657778_g168444_i0 PRJEB20058 171267 286 1.657778 4.74124508 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 56.5 0.002   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g168444 i0 96.97 14.5104895104895 33 1 12 0 112 144 1107458 1107490 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 4150 56.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
25923404 25923404 PRJEB20058_P_NODE_154084_length_308_cov_1.562753_g151261_i0 PRJEB20058 154084 308 1.562753 4.81327924 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 165 3.54e-36   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g151261 i0 78.277 36.5876623376623 267 50 85 8 20 281 4163075 4162812 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 11269 165 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26021415 26021415 PRJEB20058_P_NODE_177532_length_279_cov_1.110092_g174709_i0 PRJEB20058 177532 279 1.110092 3.09715668 Bacteria 2 Bacteria Bacteria 215 3.1e-51   NTclustered gi|2531976020|emb|OY282352.1| 199737 g174709 i0 84.234 399.483870967742 222 33 80 2 26 247 2620361 2620142 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 111456 215 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;