RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Candidatus Bathyarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB20058 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25514741 25514741 PRJEB20058_P_NODE_144625_length_321_cov_179.257692_g141804_i0 PRJEB20058 144625 321 179.257692 575.41719132 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 241 5.990000000000001e-59   NTclustered gi|2810060730|gb|CP170178.1| 3045160 g141804 i0 87.864 0.641744548286604 206 23 64 2 51 255 1145249 1145045 MAG: Candidatus Bathyarchaeia archaeon isolate Bathy6-F90_cMAG_MillC chromosome, complete genome blastn 206 241 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
26193383 26193383 PRJEB20058_P_NODE_103358_length_399_cov_13.899408_g100551_i0 PRJEB20058 103358 399 13.899408 55.45863792 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 388 2.56e-103   NTclustered gi|2810060730|gb|CP170178.1| 3045160 g100551 i0 86.066 0.917293233082707 366 45 90 6 21 381 1462636 1462272 MAG: Candidatus Bathyarchaeia archaeon isolate Bathy6-F90_cMAG_MillC chromosome, complete genome blastn 366 388 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;