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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB17675 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6399809 6399809 PRJEB17675_P_NODE_286_length_1537_cov_5.145140_g231_i0 PRJEB17675 286 1537 5.14514 79.0808018 Brachionus rubens 392764 Rotifera other_Eukaryota 1360 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g231 i0 82.682 51.9121665582303 1536 262 99 4 2 1535 22 1555 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 79789 1360 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
7673954 7673954 PRJEB17675_P_NODE_4787_length_444_cov_2.371638_g4489_i0 PRJEB17675 4787 444 2.371638 10.53007272 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 300 1.39e-76   NTclustered gi|2105975276|gb|MZ706949.1| 104777 g4489 i0 79.439 40.8738738738739 428 85 96 3 18 444 990 565 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 18148 300 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
8638933 8638933 PRJEB17675_P_NODE_12567_length_236_cov_2.263682_g12263_i0 PRJEB17675 12567 236 2.263682 5.34228952 Lecane 96445 Rotifera other_Eukaryota 318 1.89e-82   NTclustered gi|61200802|gb|AY829083.1| 96446 g12263 i0 90.871 44.271186440678 241 16 100 2 1 236 2056 1817 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 10448 318 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
12775256 12775256 PRJEB17675_P_NODE_271_length_1568_cov_12.669928_g222_i0 PRJEB17675 271 1568 12.669928 198.66447104 Brachionus rubens 392764 Rotifera other_Eukaryota 1090 0   NTclustered gi|632795131|gb|KJ489418.1| 392764 g222 i0 80.587 46.5707908163265 1432 262 91 15 4 1427 15 1438 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 73023 1090 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
12775267 12775267 PRJEB17675_P_NODE_4291_length_472_cov_2.272311_g3994_i0 PRJEB17675 4291 472 2.272311 10.72530792 Brachionus rubens 392764 Rotifera other_Eukaryota 231 5.49e-56   NTclustered gi|632795126|gb|KJ489417.1| 392764 g3994 i0 76.887 3.57203389830508 424 88 89 10 12 430 9119 8701 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 1686 231 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
12775268 12775268 PRJEB17675_P_NODE_4391_length_466_cov_5.030162_g4094_i0 PRJEB17675 4391 466 5.030162 23.44055492 Brachionus plicatilis 10195 Rotifera other_Eukaryota 150 1.5599999999999998e-31   NTclustered gi|218117256|emb|AM980956.1| 10195 g4094 i0 84.314 0.751072961373391 153 24 33 0 212 364 153 1 Brachionus plicatilis partial mRNA for 60S ribosomal protein L39, (RPL39 gene) blastn 350 150 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
12775273 12775273 PRJEB17675_P_NODE_4831_length_441_cov_7.325123_g4533_i0 PRJEB17675 4831 441 7.325123 32.30379243 Lepadella patella 231622 Rotifera other_Eukaryota 671 0   NTclustered gi|83285192|gb|DQ297739.1| 231622 g4533 i0 94.118 77.1020408163265 442 25 100 1 1 441 733 292 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 34002 671 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
16598462 16598462 PRJEB17675_P_NODE_174_length_1804_cov_7.318824_g137_i0 PRJEB17675 174 1804 7.318824 132.03158496 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 499 5.52e-136   NTclustered gi|1066800230|gb|KX364937.1| 96890 g137 i0 73.518 8.89745011086474 1484 324 80 54 5 1448 5598 7052 Brachionus rotundiformis chromosome II mitochondrion, complete sequence blastn 16051 499 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
17873313 17873313 PRJEB17675_P_NODE_5615_length_402_cov_4.136240_g5316_i0 PRJEB17675 5615 402 4.13624 16.6276848 Brachionus plicatilis 10195 Rotifera other_Eukaryota 248 4.58e-61   NTclustered gi|218117265|emb|AM980960.1| 10195 g5316 i0 81.09 1.33582089552239 312 57 77 2 92 402 13 323 Brachionus plicatilis partial mRNA for 40S ribosomal protein S20, (RPS20 gene) blastn 537 248 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
19147116 19147116 PRJEB17675_P_NODE_16156_length_200_cov_1.060606_g15852_i0 PRJEB17675 16156 200 1.060606 2.121212 Monostyla sp. MPN-2013 1443992 Rotifera other_Eukaryota 154 4.63e-33   NTclustered gi|572455655|gb|KF159018.1| 1443992 g15852 i0 85.161 17.59 155 17 76 6 1 152 238 389 Monostyla sp. MPN-2013 methionine adenosyltransferase mRNA, partial cds blastn 3518 154 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Monostyla Monostyla sp. MPN-2013
19147161 19147161 PRJEB17675_P_NODE_4156_length_481_cov_3.228700_g3862_i0 PRJEB17675 4156 481 3.2287 15.530047 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 191 9.52e-44   NTclustered gi|1800329609|gb|MN417951.1| 104777 g3862 i0 79.061 4.96673596673597 277 58 58 0 153 429 9835 10111 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 2389 191 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
20422411 20422411 PRJEB17675_P_NODE_617_length_1158_cov_2.861086_g503_i0 PRJEB17675 617 1158 2.861086 33.13137588 Brachionus plicatilis 10195 Rotifera other_Eukaryota 863 0   NTclustered gi|260063821|dbj|AB492236.1| 10195 g503 i0 82.752 62.8635578583765 974 162 84 3 1 971 62 1032 Brachionus plicatilis GAPDH mRNA for glyceraldehyde-3-phosphate dehydrogenase, complete cds blastn 72796 863 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
22973631 22973631 PRJEB17675_P_NODE_1939_length_705_cov_3.953731_g1708_i0 PRJEB17675 1939 705 3.953731 27.87380355 Brachionus rubens 392764 Rotifera other_Eukaryota 375 3.68e-99   NTclustered gi|632795126|gb|KJ489417.1| 392764 g1708 i0 80.357 30.2992907801418 504 91 71 8 1 500 404 903 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 21361 375 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
22973681 22973681 PRJEB17675_P_NODE_699_length_1087_cov_62.397338_g573_i0 PRJEB17675 699 1087 62.397338 678.25906406 Brachionus rubens 392764 Rotifera other_Eukaryota 455 7.210000000000001e-123   NTclustered gi|1802791198|gb|MN256531.1| 392764 g573 i0 80.308 21.8445262189512 650 88 58 32 436 1064 11198 11828 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 23745 455 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;