contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2571574 | 2571574 | PRJEB17675_P_NODE_7383_length_340_cov_1.836066_g7079_i0 | PRJEB17675 | 7383 | 340 | 1.836066 | 6.2426244 | Pythium sp. FFM-2010 | 888549 | SAR_Eukaryotes | SAR_Eukaryotes | 97.1 | 1.46e-15 | NTclustered | gi|312165791|gb|GU222162.1| | 888549 | g7079 | i0 | 88.75 | 7.5 | 80 | 8 | 24 | 1 | 261 | 340 | 619 | 541 | Pythium sp. FFM-2010 isolate P8209 cytochrome oxidase subunit 2 (cox2) and cytochrome oxidase subunit 1 (cox1) genes, partial cds; mitochondrial | blastn | 2550 | 97.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium sp. FFM-2010 | ||
| 10224413 | 10224413 | PRJEB17675_P_NODE_2129_length_672_cov_3.854003_g1894_i0 | PRJEB17675 | 2129 | 672 | 3.854003 | 25.89890016 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 283 | 2.18e-71 | NTclustered | gi|2794877204|ref|XM_067892388.1| | 164328 | g1894 | i0 | 80.052 | 7.02529761904762 | 386 | 73 | 57 | 4 | 118 | 501 | 64 | 447 | Phytophthora ramorum 40S ribosomal protein S14 (KRP23_72), partial mRNA | blastn | 4721 | 283 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 13739319 | 13739319 | PRJEB17675_P_NODE_4571_length_455_cov_2.816667_g4274_i0 | PRJEB17675 | 4571 | 455 | 2.816667 | 12.81583485 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 348 | 5.02e-91 | NTclustered | gi|1938229356|dbj|LC595853.1| | 1985165 | g4274 | i0 | 83.836 | 65.1142857142857 | 365 | 59 | 80 | 0 | 1 | 365 | 365 | 1 | Phytophthora castanetorum CBS 142299 btub gene for beta-tubulin, partial cds | blastn | 29627 | 348 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora castanetorum | ||
| 18837651 | 18837651 | PRJEB17675_P_NODE_18855_length_181_cov_1.095890_g18551_i0 | PRJEB17675 | 18855 | 181 | 1.09589 | 1.9835609 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 87.9 | 4.21e-13 | NTclustered | gi|2248512876|ref|NC_063791.1| | 29920 | g18551 | i0 | 84.27 | 1.68508287292818 | 89 | 14 | 49 | 0 | 72 | 160 | 21440 | 21528 | Phytophthora cactorum isolate 10300 mitochondrion, complete genome | blastn | 305 | 87.9 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cactorum | ||
| 19147108 | 19147108 | PRJEB17675_P_NODE_13976_length_220_cov_1.945946_g13672_i0 | PRJEB17675 | 13976 | 220 | 1.945946 | 4.2810812 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 198 | 2.36e-46 | NTclustered | gi|301115307|ref|XM_002905337.1| | 403677 | g13672 | i0 | 86.592 | 81.3909090909091 | 179 | 24 | 81 | 0 | 2 | 180 | 742 | 920 | Phytophthora infestans T30-4 translation elongation factor 1-alpha, putative (PITG_04640), partial mRNA | blastn | 17906 | 198 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 21698379 | 21698379 | PRJEB17675_P_NODE_20618_length_170_cov_1.770370_g20314_i0 | PRJEB17675 | 20618 | 170 | 1.77037 | 3.009629 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 95.3 | 2.33e-15 | NTclustered | gi|813184937|ref|XM_012351251.1| | 695850 | g20314 | i0 | 83.178 | 2.08823529411765 | 107 | 14 | 62 | 3 | 8 | 112 | 250 | 146 | Saprolegnia parasitica CBS 223.65 40S ribosomal protein S14 mRNA | blastn | 355 | 95.3 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 22973677 | 22973677 | PRJEB17675_P_NODE_6659_length_363_cov_1.536585_g6356_i0 | PRJEB17675 | 6659 | 363 | 1.536585 | 5.57780355 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 54.7 | 0.01 | NTclustered | gi|695379224|ref|XM_009518191.1| | 67593 | g6356 | i0 | 100 | 0.159779614325069 | 29 | 0 | 8 | 0 | 323 | 351 | 1863 | 1835 | Phytophthora sojae hypothetical protein partial mRNA | blastn | 58 | 54.7 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 24247480 | 24247480 | PRJEB17675_P_NODE_19340_length_178_cov_1.118881_g19036_i0 | PRJEB17675 | 19340 | 178 | 1.118881 | 1.99160818 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 135 | 1.4500000000000002e-27 | NTclustered | gi|698822852|ref|XM_009846153.1| | 112090 | g19036 | i0 | 81.176 | 4.73033707865169 | 170 | 30 | 95 | 2 | 1 | 169 | 615 | 783 | Aphanomyces astaci CK1/CK1/CK1-D protein kinase mRNA | blastn | 842 | 135 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 25211919 | 25211919 | PRJEB17675_P_NODE_3240_length_545_cov_5.815686_g2964_i0 | PRJEB17675 | 3240 | 545 | 5.815686 | 31.6954887 | Saprolegniales | 4763 | SAR_Eukaryotes | SAR_Eukaryotes | 152 | 5.139999999999999e-32 | NTclustered | gi|533310373|ref|NC_022179.1| | 74557 | g2964 | i0 | 77.007 | 40.2752293577982 | 274 | 57 | 50 | 4 | 275 | 545 | 12106 | 12376 | Thraustotheca clavata mitochondrion, complete genome | blastn | 21950 | 152 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;