RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Evosea · 25 ✖

tax_clade 1

bioproject 1

  • PRJEB17675 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21677 21677 PRJEB17675_P_NODE_2441_length_630_cov_2.904202_g2199_i0 PRJEB17675 2441 630 2.904202 18.2964726 Cavenderia fasciculata 261658 Evosea other_Eukaryota 54.7 0.017   NTclustered gi|470250759|ref|XM_004358420.1| 261658 g2199 i0 100 0.0984126984126984 29 0 5 0 181 209 500 472 Cavenderia fasciculata uncharacterized protein (DFA_00488), partial mRNA blastn 62 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
21704 21704 PRJEB17675_P_NODE_5021_length_433_cov_1.608040_g4722_i0 PRJEB17675 5021 433 1.60804 6.9628132 Dictyostelium purpureum 5786 Evosea other_Eukaryota 311 6.25e-80   NTclustered gi|330818907|ref|XM_003291484.1| 5786 g4722 i0 80.825 46.0854503464203 412 66 94 12 23 427 8 413 Dictyostelium purpureum ribosomal protein L10E (DICPUDRAFT_92700), mRNA blastn 19955 311 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
985849 985849 PRJEB17675_P_NODE_5221_length_422_cov_2.682171_g4922_i0 PRJEB17675 5221 422 2.682171 11.31876162 Dictyostelium 5782 Evosea other_Eukaryota 342 2.15e-89   NTclustered gi|167946|gb|M23753.1|DDIUBIQF 44689 g4922 i0 81.535 128.800947867299 417 75 99 2 7 422 965 550 D.discoideum ubiquitin mRNA, complete cds, clone DCUB14 blastn 54354 342 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
1295875 1295875 PRJEB17675_P_NODE_3382_length_534_cov_4.084168_g3102_i0 PRJEB17675 3382 534 4.084168 21.80945712 Heterostelium album 2086695 Evosea other_Eukaryota 93.5 3.09e-14   NTclustered gi|1160555830|ref|XM_020573740.1| 670386 g3102 i0 86.517 1.06554307116105 89 6 29 1 230 318 349 431 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 569 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
2571547 2571547 PRJEB17675_P_NODE_24943_length_152_cov_1.025641_g24639_i0 PRJEB17675 24943 152 1.025641 1.55897432 Heterostelium album 2086695 Evosea other_Eukaryota 86.1 1.23e-12   NTclustered gi|1160570380|ref|XM_020574684.1| 670386 g24639 i0 80.172 0.763157894736842 116 21 76 2 1 115 362 476 Polysphondylium pallidum PN500 vacuolar ATPase proteolipid subunit (vatP), partial mRNA blastn 116 86.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
5124042 5124042 PRJEB17675_P_NODE_13805_length_222_cov_1.497326_g13501_i0 PRJEB17675 13805 222 1.497326 3.32406372 Cavenderia fasciculata 261658 Evosea other_Eukaryota 137 5.279999999999999e-28   NTclustered gi|470251741|ref|XM_004358911.1| 261658 g13501 i0 80.328 0.824324324324324 183 34 82 2 40 221 1025 844 Cavenderia fasciculata calreticulin (crtA), partial mRNA blastn 183 137 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5124073 5124073 PRJEB17675_P_NODE_21825_length_164_cov_1.821705_g21521_i0 PRJEB17675 21825 164 1.821705 2.9875962 Acytostelium subglobosum 361139 Evosea other_Eukaryota 71.3 3.78e-8   NTclustered gi|831771414|ref|XM_012897841.1| 1410327 g21521 i0 100 0.402439024390244 38 0 23 0 20 57 8425 8462 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 66 71.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
7363541 7363541 PRJEB17675_P_NODE_1506_length_798_cov_2.032765_g1308_i0 PRJEB17675 1506 798 2.032765 16.2214647 Dictyostelium 5782 Evosea other_Eukaryota 374 1.51e-98   NTclustered gi|433874|emb|X75263.1| 44689 g1308 i0 80.567 54.1052631578947 494 89 61 6 1 490 1217 1707 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70) blastn 43176 374 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7673927 7673927 PRJEB17675_P_NODE_25127_length_151_cov_1.379310_g24823_i0 PRJEB17675 25127 151 1.37931 2.0827581 Acytostelium subglobosum 361139 Evosea other_Eukaryota 58.4 2.65e-4   NTclustered gi|831781239|ref|XM_012900843.1| 1410327 g24823 i0 85.455 0.364238410596026 55 8 36 0 5 59 840 894 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 55 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10224441 10224441 PRJEB17675_P_NODE_4049_length_487_cov_2.765487_g3756_i0 PRJEB17675 4049 487 2.765487 13.46792169 Dictyostelium purpureum 5786 Evosea other_Eukaryota 73.1 3.65e-8   NTclustered gi|330796139|ref|XM_003286079.1| 5786 g3756 i0 86.567 0.273100616016427 67 8 14 1 32 97 3309 3375 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_97284), mRNA blastn 133 73.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
11499661 11499661 PRJEB17675_P_NODE_15690_length_203_cov_2.464286_g15386_i0 PRJEB17675 15690 203 2.464286 5.00250058 Arcyria cinerea 137621 Evosea other_Eukaryota 195 2.78e-45   NTclustered gi|2772191585|gb|PQ014970.1| 137621 g15386 i0 84 99.1379310344828 200 32 99 0 4 203 355 156 Arcyria cinerea voucher sc32832 translation elongation factor 1-alpha (EF1a) gene, partial cds blastn 20125 195 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria cinerea
12465007 12465007 PRJEB17675_P_NODE_11590_length_250_cov_1.204651_g11286_i0 PRJEB17675 11590 250 1.204651 3.0116275 Dictyostelium 5782 Evosea other_Eukaryota 255 1.61e-63   NTclustered gi|433874|emb|X75263.1| 44689 g11286 i0 88.571 54.24 210 24 84 0 41 250 279 70 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70) blastn 13560 255 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
12775216 12775216 PRJEB17675_P_NODE_14331_length_216_cov_1.988950_g14027_i0 PRJEB17675 14331 216 1.98895 4.296132 Dictyostelium purpureum 5786 Evosea other_Eukaryota 171 5.04e-38   NTclustered gi|330842692|ref|XM_003293259.1| 5786 g14027 i0 82.564 2.72222222222222 195 32 90 2 23 216 1836 1643 Dictyostelium purpureum elongation factor 2 (DICPUDRAFT_58424), mRNA blastn 588 171 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12775249 12775249 PRJEB17675_P_NODE_23771_length_156_cov_1.611570_g23467_i0 PRJEB17675 23771 156 1.61157 2.5140492 Entamoeba histolytica 5759 Evosea other_Eukaryota 52.8 0.013   NTclustered gi|183234635|ref|XM_643696.2| 294381 g23467 i0 100 0.179487179487179 28 0 18 0 46 73 2153 2126 Entamoeba histolytica HM-1:IMSS uncharacterized protein (EHI_025880), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
14049844 14049844 PRJEB17675_P_NODE_7572_length_334_cov_5.217391_g7268_i0 PRJEB17675 7572 334 5.217391 17.42608594 Acytostelium subglobosum 361139 Evosea other_Eukaryota 60.2 1.88e-4   NTclustered gi|831773671|ref|XM_012898527.1| 1410327 g7268 i0 100 0.0958083832335329 32 0 10 0 279 310 554 523 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 32 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15323810 15323810 PRJEB17675_P_NODE_15833_length_202_cov_1.676647_g15529_i0 PRJEB17675 15833 202 1.676647 3.38682694 Filamoeba nolandi 136452 Evosea other_Eukaryota 135 1.7000000000000002e-27   NTclustered gi|146448849|gb|EF513192.1| 136452 g15529 i0 79.31 58.0594059405941 203 34 99 6 4 202 1164 966 Filamoeba nolandi elongation factor 1A (EF1A) gene, partial cds blastn 11728 135 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba nolandi
15323827 15323827 PRJEB17675_P_NODE_20153_length_173_cov_1.159420_g19849_i0 PRJEB17675 20153 173 1.15942 2.0057966 Dictyostelium purpureum 5786 Evosea other_Eukaryota 150 5.009999999999999e-32   NTclustered gi|330795075|ref|XM_003285553.1| 5786 g19849 i0 85.816 81.0924855491329 141 20 82 0 6 146 1972 2112 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_46211), mRNA blastn 14029 150 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15323869 15323869 PRJEB17675_P_NODE_6593_length_365_cov_1.700000_g6290_i0 PRJEB17675 6593 365 1.7 6.205 Entamoeba dispar 46681 Evosea other_Eukaryota 333 1.1e-86   NTclustered gi|167395203|ref|XM_001741218.1| 370354 g6290 i0 84 82.5205479452055 350 53 95 3 18 365 709 1057 Entamoeba dispar SAW760 vacuolar ATP synthase subunit B, putative (EDI_202200), partial mRNA blastn 30120 333 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
16598440 16598440 PRJEB17675_P_NODE_1214_length_878_cov_9.913405_g180_i1 PRJEB17675 1214 878 9.913405 87.0396959 Squamamoeba japonica 1167875 Evosea other_Eukaryota 257 1.75e-63   NTclustered gi|381423465|gb|JN638030.1| 1167875 g180 i1 83.392 26.6435079726651 283 41 32 6 256 534 1459 1179 Squamamoeba japonica strain CCAP 1593/1 clone 2218 18S ribosomal RNA gene, partial sequence blastn 23393 257 1 Eukaryota Amoebozoa   Evosea       Squamamoeba Squamamoeba japonica
20422341 20422341 PRJEB17675_P_NODE_13697_length_223_cov_1.595745_g13393_i0 PRJEB17675 13697 223 1.595745 3.55851135 Entamoeba dispar 46681 Evosea other_Eukaryota 132 2.47e-26   NTclustered gi|167393124|ref|XM_001740384.1| 370354 g13393 i0 80.925 44.2690582959641 173 27 76 5 12 181 183 14 Entamoeba dispar SAW760 glyceraldehyde-3-phosphate dehydrogenase, putative (EDI_031900), partial mRNA blastn 9872 132 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
20422420 20422420 PRJEB17675_P_NODE_7697_length_330_cov_7.579661_g7393_i0 PRJEB17675 7697 330 7.579661 25.0128813 Acytostelium subglobosum 361139 Evosea other_Eukaryota 60.2 1.86e-4   NTclustered gi|831773671|ref|XM_012898527.1| 1410327 g7393 i0 100 0.096969696969697 32 0 10 0 25 56 523 554 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 32 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
21698370 21698370 PRJEB17675_P_NODE_16818_length_195_cov_1.312500_g16514_i0 PRJEB17675 16818 195 1.3125 2.559375 Dictyostelium purpureum 5786 Evosea other_Eukaryota 134 5.850000000000001e-27   NTclustered gi|330840296|ref|XM_003292106.1| 5786 g16514 i0 85.271 1.03076923076923 129 19 66 0 6 134 1891 2019 Dictyostelium purpureum major vault protein-alpha (DICPUDRAFT_50257), partial mRNA blastn 201 134 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
22662793 22662793 PRJEB17675_P_NODE_22518_length_161_cov_1.587302_g22214_i0 PRJEB17675 22518 161 1.587302 2.55555622 Flamella 490353 Evosea other_Eukaryota 276 7.29e-70   NTclustered gi|163943979|gb|EU186023.1| 490516 g22214 i0 97.516 72.5465838509317 161 4 100 0 1 161 200 360 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 11680 276 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
22973616 22973616 PRJEB17675_P_NODE_14259_length_217_cov_1.719780_g13955_i0 PRJEB17675 14259 217 1.71978 3.7319226 Acytostelium subglobosum 361139 Evosea other_Eukaryota 139 1.43e-28   NTclustered gi|831773668|ref|XM_012898526.1| 1410327 g13955 i0 78.571 2.65898617511521 210 45 97 0 8 217 3113 2904 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 577 139 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
24247500 24247500 PRJEB17675_P_NODE_22860_length_160_cov_1.208000_g22556_i0 PRJEB17675 22860 160 1.208 1.9328 Heterostelium album 2086695 Evosea other_Eukaryota 167 4.5399999999999995e-37   NTclustered gi|1160556414|ref|XM_020574032.1| 670386 g22556 i0 87.943 26.65625 141 17 88 0 3 143 172 32 Polysphondylium pallidum PN500 ADP-ribosylation factor (arfA), partial mRNA blastn 4265 167 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;