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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB17675 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3847830 3847830 PRJEB17675_P_NODE_12464_length_238_cov_1.157635_g12160_i0 PRJEB17675 12464 238 1.157635 2.7551713 Lytechinus pictus 7653 Echinodermata other_Eukaryota 182 2.61e-41   NTclustered gi|2707408381|ref|XM_054893204.2| 7653 g12160 i0 90.58 16.1302521008403 138 12 58 1 102 238 605 468 PREDICTED: Lytechinus pictus dynein light chain 2, cytoplasmic-like (LOC129254696), mRNA blastn 3839 182 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
5124102 5124102 PRJEB17675_P_NODE_5665_length_400_cov_2.049315_g5366_i0 PRJEB17675 5665 400 2.049315 8.19726 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.038   NTclustered gi|1826614684|ref|XM_033244415.1| 1529436 g5366 i0 100 0.14 28 0 7 0 114 141 700 727 PREDICTED: Anneissia japonica uncharacterized LOC117103791 (LOC117103791), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
8948726 8948726 PRJEB17675_P_NODE_7588_length_334_cov_1.605351_g7284_i0 PRJEB17675 7588 334 1.605351 5.36187234 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 150 1.09e-31   NTclustered gi|2037982232|ref|XM_041603685.1| 7654 g7284 i0 80.612 3.53892215568862 196 36 58 2 140 334 180 374 PREDICTED: Lytechinus variegatus rho-related GTP-binding protein RhoA-B-like (LOC121411150), transcript variant X1, mRNA blastn 1182 150 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
14049797 14049797 PRJEB17675_P_NODE_21232_length_167_cov_1.515152_g20928_i0 PRJEB17675 21232 167 1.515152 2.53030384 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 63.9 6.47e-6   NTclustered gi|1752373891|ref|XM_030990776.1| 7668 g20928 i0 97.297 2.38922155688623 37 1 22 0 131 167 1847 1883 PREDICTED: Strongylocentrotus purpuratus 60 kDa heat shock protein, mitochondrial (LOC590510), mRNA blastn 399 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
17873241 17873241 PRJEB17675_P_NODE_12235_length_240_cov_3.039024_g11931_i0 PRJEB17675 12235 240 3.039024 7.2936576 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 104 5.88e-18   NTclustered gi|1752399769|ref|XM_030972759.1| 7668 g11931 i0 87.097 3.44583333333333 93 10 38 2 1 92 340 431 PREDICTED: Strongylocentrotus purpuratus 40S ribosomal protein S23 (LOC590530), mRNA blastn 827 104 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
22662792 22662792 PRJEB17675_P_NODE_22218_length_163_cov_0.859375_g21914_i0 PRJEB17675 22218 163 0.859375 1.40078125 root 1 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|1752349763|ref|XM_011681162.2| 7668 g21914 i0 100 1.09815950920245 30 0 18 0 25 54 114 143 PREDICTED: Strongylocentrotus purpuratus glycoprotein 3-alpha-L-fucosyltransferase A-like (LOC589688), mRNA blastn 179 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;