RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB17675 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2571536 2571536 PRJEB17675_P_NODE_223_length_1662_cov_13.105716_g179_i0 PRJEB17675 223 1662 13.105716 217.81699992 Guinardia delicatula 1244696 SAR_Eukaryotes SAR_Eukaryotes 316 5.49e-81   NTclustered gi|2074156200|gb|MW413905.1| 216802 g179 i0 75.099 38.384476534296 755 149 44 29 190 922 23865 24602 Guinardia delicatula mitochondrion, complete genome blastn 63795 316 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia delicatula
24247536 24247536 PRJEB17675_P_NODE_600_length_1169_cov_6.547619_g179_i1 PRJEB17675 600 1169 6.547619 76.54166611 Guinardia delicatula 1244696 SAR_Eukaryotes SAR_Eukaryotes 237 3.0699999999999995e-57   NTclustered gi|2074156200|gb|MW413905.1| 216802 g179 i1 78.701 32.8023952095808 385 61 32 15 741 1115 24602 24229 Guinardia delicatula mitochondrion, complete genome blastn 38346 237 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia delicatula

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;