RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB17675 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2571546 2571546 PRJEB17675_P_NODE_24843_length_152_cov_1.367521_g24539_i0 PRJEB17675 24843 152 1.367521 2.07863192 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 108 2.62e-19   NTclustered gi|1624463987|ref|XM_029005513.1| 5858 g24539 i0 85.437 2.96052631578947 103 15 68 0 50 152 25 127 Plasmodium malariae ras-related protein Rab-1B, putative (PmUG01_10032000), partial mRNA blastn 450 108 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
10224417 10224417 PRJEB17675_P_NODE_22629_length_161_cov_0.952381_g22325_i0 PRJEB17675 22629 161 0.952381 1.53333341 Cryptosporidium serpentis 83999 SAR_Eukaryotes SAR_Eukaryotes 110 7.83e-20   NTclustered gi|8515219|gb|AF221541.1|AF221541 83999 g22325 i0 82.927 43.2732919254658 123 19 76 2 36 157 1523 1402 Cryptosporidium serpentis heat shock protein 70 (HSP70) gene, partial cds blastn 6967 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium serpentis
16598505 16598505 PRJEB17675_P_NODE_3654_length_514_cov_2.505219_g3371_i0 PRJEB17675 3654 514 2.505219 12.87682566 Babesia sp. HG-2011 1125846 SAR_Eukaryotes SAR_Eukaryotes 134 1.7500000000000002e-26   NTclustered gi|363586011|gb|JN391437.1| 1125846 g3371 i0 88.288 21.7412451361868 111 13 22 0 1 111 1361 1471 Babesia sp. HG-2011 isolate Xinjiang 28S ribosomal RNA gene, partial sequence blastn 11175 134 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. HG-2011
17873269 17873269 PRJEB17675_P_NODE_19115_length_179_cov_1.652778_g18811_i0 PRJEB17675 19115 179 1.652778 2.95847262 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 102 1.48e-17   NTclustered gi|2787669839|ref|XM_067325851.1| 310047 g18811 i0 85 7.22905027932961 100 15 56 0 2 101 267 366 Cryptosporidium bovis 60S ribosomal L10 (FG379_000440), partial mRNA blastn 1294 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
17873331 17873331 PRJEB17675_P_NODE_9195_length_292_cov_1.715953_g8891_i0 PRJEB17675 9195 292 1.715953 5.01058276 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 298 3.15e-76   NTclustered gi|1620168153|ref|XM_028681660.1| 880535 g8891 i0 85.223 83.8287671232877 291 41 99 2 3 292 731 442 Plasmodium sp. gorilla clade G2 heat shock protein 70 (PADL01_0830900), partial mRNA blastn 24478 298 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
21387983 21387983 PRJEB17675_P_NODE_4937_length_436_cov_3.773067_g4639_i0 PRJEB17675 4937 436 3.773067 16.45057212 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 243 2.3300000000000007e-59   NTclustered gi|1624465227|ref|XM_029006196.1| 5858 g4639 i0 77.861 42.605504587156 402 82 91 7 40 436 1 400 Plasmodium malariae histone H3 variant, putative (PMUG01_11052600), partial mRNA blastn 18576 243 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
22662779 22662779 PRJEB17675_P_NODE_11878_length_246_cov_1.132701_g11574_i0 PRJEB17675 11878 246 1.132701 2.78644446 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 159 1.27e-34   NTclustered gi|669200361|ref|XM_008626964.1| 54757 g11574 i0 79.654 8.97154471544715 231 40 93 7 2 229 1169 943 Plasmodium vinckei vinckei heat shock protein 70, putative (PVVCY_0801630), partial mRNA blastn 2207 159 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
22662784 22662784 PRJEB17675_P_NODE_16018_length_201_cov_1.204819_g15714_i0 PRJEB17675 16018 201 1.204819 2.42168619 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2795618718|ref|XM_068063389.1| 483139 g15714 i0 90.476 2.44278606965174 42 3 20 1 153 193 5333 5374 Cystoisospora suis ap2 domain transcription factor ap2viib-3 (CSUI_003191), mRNA blastn 491 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;