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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJEB17675 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3847888 3847888 PRJEB17675_P_NODE_4024_length_488_cov_2.814570_g3733_i0 PRJEB17675 4024 488 2.81457 13.7351016 Chlamydomonas reinhardtii 3055 Plants Plants 431 5.229999999999998e-116   NTclustered gi|2082262214|ref|XM_001693945.2| 3055 g3733 i0 84.687 117.934426229508 431 66 88 0 1 431 541 111 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g549550v5), mRNA blastn 57552 431 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5124059 5124059 PRJEB17675_P_NODE_16685_length_196_cov_1.434783_g16381_i0 PRJEB17675 16685 196 1.434783 2.81217468 Monoraphidium neglectum 145388 Plants Plants 54.7 0.005   NTclustered gi|926784117|ref|XM_014045079.1| 145388 g16381 i0 96.875 0.306122448979592 32 1 16 0 74 105 1968 1999 Monoraphidium neglectum hypothetical protein mRNA blastn 60 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
6088956 6088956 PRJEB17675_P_NODE_1765_length_736_cov_6.613409_g1550_i0 PRJEB17675 1765 736 6.613409 48.67469024 Eukaryota 2759 Plants Plants 202 6.92e-47   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g1550 i0 87.429 20.7513586956522 175 22 24 0 223 397 74 248 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 15273 204 0.990196078431373 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6088958 6088958 PRJEB17675_P_NODE_1865_length_719_cov_6.814327_g1641_i0 PRJEB17675 1865 719 6.814327 48.99501113 Eukaryota 2759 Plants Plants 202 6.749999999999999e-47   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g1641 i0 87.429 21.2420027816412 175 22 24 0 323 497 248 74 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 15273 204 0.990196078431373 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12465013 12465013 PRJEB17675_P_NODE_1770_length_735_cov_6.528571_g1555_i0 PRJEB17675 1770 735 6.528571 47.98499685 Eukaryota 2759 Plants Plants 292 3.98e-74   NTclustered gi|926781221|ref|XM_014043631.1| 145388 g1555 i0 89.868 90.8843537414966 227 23 31 0 368 594 227 1 Monoraphidium neglectum large subunit ribosomal protein L40e mRNA blastn 66800 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
12465019 12465019 PRJEB17675_P_NODE_2330_length_644_cov_6.709360_g2088_i0 PRJEB17675 2330 644 6.70936 43.2082784 Eukaryota 2759 Plants Plants 202 6.01e-47   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g2088 i0 87.429 22.7003105590062 175 22 27 0 410 584 248 74 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 14619 204 0.990196078431373 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12775271 12775271 PRJEB17675_P_NODE_451_length_1311_cov_11.423981_g340_i1 PRJEB17675 451 1311 11.423981 149.76839091 Chlamydomonas reinhardtii 3055 Plants Plants 1157 0   NTclustered gi|2082262214|ref|XM_001693945.2| 3055 g340 i1 83.386 93.604118993135 1258 199 96 9 2 1254 1363 111 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g549550v5), mRNA blastn 122715 1157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21387980 21387980 PRJEB17675_P_NODE_4157_length_481_cov_2.762332_g3863_i0 PRJEB17675 4157 481 2.762332 13.28681692 Eukaryota 2759 Plants Plants 723 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g3863 i0 93.958 95.9147609147609 480 25 99 4 1 479 48 524 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 46135 723 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
23938218 23938218 PRJEB17675_P_NODE_3299_length_540_cov_7.239604_g3020_i0 PRJEB17675 3299 540 7.239604 39.0938616 Eukaryota 2759 Plants Plants 202 4.979999999999999e-47   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g3020 i0 87.429 26.8074074074074 175 22 32 0 61 235 74 248 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 14476 204 0.990196078431373 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24247484 24247484 PRJEB17675_P_NODE_1960_length_702_cov_2.893553_g1728_i0 PRJEB17675 1960 702 2.893553 20.31274206 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.005   NTclustered gi|2082250453|ref|XM_001690409.2| 3055 g1728 i0 100 0.0427350427350427 30 0 4 0 188 217 206 177 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g328350v5), mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24247486 24247486 PRJEB17675_P_NODE_20040_length_173_cov_3.427536_g19736_i0 PRJEB17675 20040 173 3.427536 5.92963728 Trebouxia sp. A1-2 2608996 Plants Plants 91.6 3.08e-14   NTclustered gi|1825511251|gb|MN642622.1| 2608996 g19736 i0 88.312 3.35838150289017 77 8 44 1 12 87 86129 86205 Trebouxia sp. A1-2 mitochondrion, complete genome blastn 581 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;