RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB17675" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJEB17675 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12775248 12775248 PRJEB17675_P_NODE_23691_length_156_cov_2.314050_g23387_i0 PRJEB17675 23691 156 2.31405 3.609918 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 167 4.4e-37   NTclustered gi|2794942399|ref|XM_067874343.1| 2049356 g23387 i0 87.075 21.7435897435897 147 19 94 0 9 155 260 406 Monocercomonoides exilis putative 40S ribosomal protein S23-1 (MONOS_4281), mRNA blastn 3392 167 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16598531 16598531 PRJEB17675_P_NODE_8814_length_301_cov_1.503759_g8510_i0 PRJEB17675 8814 301 1.503759 4.52631459 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794962332|ref|XM_067877961.1| 2049356 g8510 i0 100 0.0963455149501661 29 0 10 0 174 202 19604 19632 Monocercomonoides exilis uncharacterized protein (MONOS_762), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22973620 22973620 PRJEB17675_P_NODE_15659_length_204_cov_1.142012_g15355_i0 PRJEB17675 15659 204 1.142012 2.32970448 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 165 2.19e-36   NTclustered gi|119117138|gb|DQ925210.1| 413579 g15355 i0 84.848 33.9607843137255 165 23 80 2 41 204 907 744 Unidentified Oxymonadida clone R19 alpha-tubulin (Atub) mRNA, partial cds blastn 6928 165 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;