RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB15333" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB15333 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6399759 6399759 PRJEB15333_P_NODE_4486_length_305_cov_1.496094_g4402_i0 PRJEB15333 4486 305 1.496094 4.5630867 Malassezia restricta 76775 Fungi Fungi 481 3.06e-131   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g4402 i0 96.259 96.1803278688525 294 9 96 1 12 305 1382 1673 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 29335 481 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8638926 8638926 PRJEB15333_P_NODE_19507_length_164_cov_0.904348_g19423_i0 PRJEB15333 19507 164 0.904348 1.48313072 Malassezia 55193 Fungi Fungi 298 1.59e-76   NTclustered gi|1805972860|gb|CP046440.1| 76773 g19423 i0 99.39 90.8841463414634 164 1 100 0 1 164 2009 2172 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 14905 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
16288519 16288519 PRJEB15333_P_NODE_16133_length_172_cov_2.073171_g16049_i0 PRJEB15333 16133 172 2.073171 3.56585412 Fungi 4751 Fungi Fungi 309 7.75e-80   NTclustered gi|915512607|gb|KP825390.1| 76775 g16049 i0 99.412 98.8372093023256 170 1 99 0 3 172 61 230 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 17000 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;