RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB15333" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB15333 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2571491 2571491 PRJEB15333_P_NODE_19383_length_164_cov_1.043478_g19299_i0 PRJEB15333 19383 164 1.043478 1.71130392 Aspergillus steynii 306088 Fungi Fungi 56.5 0.001   NTclustered gi|1383882362|ref|XM_024855214.1| 1392250 g19299 i0 100 0.182926829268293 30 0 18 0 27 56 2053 2024 Aspergillus steynii IBT 23096 uncharacterized protein (P170DRAFT_514532), partial mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus steynii
7363538 7363538 PRJEB15333_P_NODE_8886_length_225_cov_12.659091_g8802_i0 PRJEB15333 8886 225 12.659091 28.48295475 Opisthokonta 33154 Fungi Fungi 416 6.159999999999998e-112   NTclustered gi|66805490|gb|DQ008146.1| 29917 g8802 i0 100 100 225 0 100 0 1 225 422 198 Cladosporium cladosporioides strain CBS 109501 28S large subunit ribosomal RNA gene, partial sequence blastn 22500 416 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
7673866 7673866 PRJEB15333_P_NODE_17547_length_168_cov_0.873950_g17463_i0 PRJEB15333 17547 168 0.87395 1.468236 Cladosporium sp. 1707700 Fungi Fungi 281 1.65e-71   NTclustered gi|1905450536|gb|MN657180.1| 1707700 g17463 i0 97.006 72.6785714285714 167 5 99 0 1 167 28868 29034 Cladosporium sp. strain YFCC8620 mitochondrion, complete genome blastn 12210 281 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium sp.
9914002 9914002 PRJEB15333_P_NODE_15208_length_177_cov_1.640625_g15124_i0 PRJEB15333 15208 177 1.640625 2.90390625 Ascomycota 4890 Fungi Fungi 322 1.03e-83   NTclustered gi|390195128|gb|JQ689074.1| 34364 g15124 i0 99.435 100 177 1 100 0 1 177 2519 2695 Trigonopsis variabilis strain NRRL Y-1579 26S ribosomal RNA gene, partial sequence blastn 17700 322 1 Eukaryota Opisthokonta Fungi Ascomycota Trigonopsidomycetes Trigonopsidales Trigonopsidaceae Trigonopsis Trigonopsis variabilis
14049743 14049743 PRJEB15333_P_NODE_12252_length_195_cov_1.493151_g12168_i0 PRJEB15333 12252 195 1.493151 2.91164445 Saccharomyces cerevisiae 4932 Fungi Fungi 303 4.21e-78   NTclustered gi|2227684184|gb|ON306668.1| 4932 g12168 i0 95.312 98.5179487179487 192 8 98 1 5 195 362 171 Saccharomyces cerevisiae strain HBUAS61762 large subunit ribosomal RNA gene, partial sequence blastn 19211 303 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
15013695 15013695 PRJEB15333_P_NODE_6172_length_265_cov_1.125000_g6088_i0 PRJEB15333 6172 265 1.125 2.98125 Dothideomycetes 147541 Fungi Fungi 479 9.38e-131   NTclustered gi|1358186636|gb|MH047193.1| 29918 g6088 i0 99.245 100.007547169811 265 2 100 0 1 265 4309 4045 Cladosporium herbarum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26502 479 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium herbarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;