RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14803 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3847733 3847733 PRJEB14803_P_NODE_47464_length_150_cov_1.373913_g46998_i0 PRJEB14803 47464 150 1.373913 2.0608695 uncultured Desulfobacter sp. 240139 Bacteria Bacteria 54.7 0.003   NTclustered gi|2814788332|emb|OY762228.2| 240139 g46998 i0 100 0.193333333333333 29 0 19 0 98 126 604126 604154 MAG: uncultured Desulfobacter sp. isolate cd87f30c-30a5-471b-81aa-180dc00a34f5 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter uncultured Desulfobacter sp.
5123920 5123920 PRJEB14803_P_NODE_40925_length_163_cov_1.554688_g40459_i0 PRJEB14803 40925 163 1.554688 2.53414144 Desulfosarcina sp. BuS5 933262 Bacteria Bacteria 87.9 3.72e-13   NTclustered gi|2447237393|gb|CP087952.1| 933262 g40459 i0 87.013 0.47239263803681 77 10 47 0 76 152 3332962 3332886 Desulfosarcina sp. BuS5 chromosome, complete genome blastn 77 87.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina Desulfosarcina sp. BuS5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;