contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21510 | 21510 | PRJEB14803_P_NODE_3281_length_787_cov_2.901596_g2947_i0 | PRJEB14803 | 3281 | 787 | 2.901596 | 22.83556052 | Pirellula sp. SH-Sr6A | 1632865 | Bacteria | Bacteria | 63.9 | 3.65e-5 | NTclustered | gi|1015448679|gb|CP011272.1| | 1632865 | g2947 | i0 | 100 | 0.19440914866582 | 34 | 0 | 4 | 0 | 250 | 283 | 4544486 | 4544519 | Pirellula sp. SH-Sr6A, complete genome | blastn | 153 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellula | Pirellula sp. SH-Sr6A | |
| 21547 | 21547 | PRJEB14803_P_NODE_41001_length_163_cov_1.250000_g40535_i0 | PRJEB14803 | 41001 | 163 | 1.25 | 2.0375 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 217 | 4.5499999999999996e-52 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g40535 | i0 | 90.741 | 27.7730061349693 | 162 | 15 | 99 | 0 | 2 | 163 | 4318067 | 4317906 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 4527 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 5123914 | 5123914 | PRJEB14803_P_NODE_40025_length_165_cov_1.846154_g39559_i0 | PRJEB14803 | 40025 | 165 | 1.846154 | 3.0461541 | Paludisphaera borealis | 1387353 | Bacteria | Bacteria | 220 | 3.57e-53 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g39559 | i0 | 91.358 | 46.5515151515152 | 162 | 12 | 98 | 2 | 1 | 161 | 122250 | 122410 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 7681 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 6088895 | 6088895 | PRJEB14803_P_NODE_10205_length_403_cov_1.543478_g9740_i0 | PRJEB14803 | 10205 | 403 | 1.543478 | 6.22021634 | Isosphaera | 127 | Bacteria | Bacteria | 438 | 2.5399999999999993e-118 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g9740 | i0 | 86.453 | 115.141439205955 | 406 | 48 | 100 | 7 | 1 | 403 | 494 | 93 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 46402 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 13739266 | 13739266 | PRJEB14803_P_NODE_32611_length_188_cov_1.294118_g32145_i0 | PRJEB14803 | 32611 | 188 | 1.294118 | 2.43294184 | Isosphaera | 127 | Bacteria | Bacteria | 263 | 6.839999999999999e-66 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g32145 | i0 | 92.063 | 114 | 189 | 12 | 100 | 3 | 1 | 188 | 711 | 897 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 21432 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 14049634 | 14049634 | PRJEB14803_P_NODE_39992_length_165_cov_2.153846_g39526_i0 | PRJEB14803 | 39992 | 165 | 2.153846 | 3.5538459 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g39526 | i0 | 100 | 0.16969696969697 | 28 | 0 | 17 | 0 | 49 | 76 | 1564158 | 1564131 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 15323519 | 15323519 | PRJEB14803_P_NODE_14153_length_325_cov_1.641379_g13688_i0 | PRJEB14803 | 14153 | 325 | 1.641379 | 5.33448175 | Candidatus Nostocoides limicola III | 121133 | Bacteria | Bacteria | 523 | 5.379999999999999e-144 | NTclustered | gi|7670851|gb|AF244748.1|AF244748 | 121133 | g13688 | i0 | 96.541 | 104.550769230769 | 318 | 8 | 98 | 3 | 1 | 317 | 581 | 266 | Nostocoida limicola III strain Ben220 16S ribosomal RNA gene, partial sequence | blastn | 33979 | 523 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Candidatus Nostocoides limicola III | |||
| 17873029 | 17873029 | PRJEB14803_P_NODE_24635_length_225_cov_1.452632_g24169_i0 | PRJEB14803 | 24635 | 225 | 1.452632 | 3.268422 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 366 | 6.29e-97 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g24169 | i0 | 96.396 | 311.493333333333 | 222 | 8 | 99 | 0 | 2 | 223 | 2192218 | 2192439 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 70086 | 366 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 19146942 | 19146942 | PRJEB14803_P_NODE_26536_length_214_cov_1.592179_g26070_i0 | PRJEB14803 | 26536 | 214 | 1.592179 | 3.40726306 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 154 | 5.02e-33 | NTclustered | gi|1927961636|gb|CP054187.1| | 2052181 | g26070 | i0 | 89.916 | 43.4205607476636 | 119 | 12 | 56 | 0 | 1 | 119 | 2582931 | 2583049 | MAG: Planctomycetia bacterium isolate H1_PLA2 chromosome, complete genome | blastn | 9292 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 20112359 | 20112359 | PRJEB14803_P_NODE_24816_length_224_cov_1.317460_g24350_i0 | PRJEB14803 | 24816 | 224 | 1.31746 | 2.9511104 | Isosphaera | 127 | Bacteria | Bacteria | 287 | 5.009999999999999e-73 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g24350 | i0 | 89.732 | 212.272321428571 | 224 | 23 | 100 | 0 | 1 | 224 | 438 | 661 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 47549 | 287 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 22973465 | 22973465 | PRJEB14803_P_NODE_37779_length_171_cov_1.786765_g37313_i0 | PRJEB14803 | 37779 | 171 | 1.786765 | 3.05536815 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g37313 | i0 | 100 | 0.169590643274854 | 29 | 0 | 17 | 0 | 101 | 129 | 3551731 | 3551703 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 24247324 | 24247324 | PRJEB14803_P_NODE_36860_length_174_cov_1.561151_g36394_i0 | PRJEB14803 | 36860 | 174 | 1.561151 | 2.71640274 | uncultured Phycisphaerales bacterium | 904075 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2874253847|emb|OY969903.1| | 904075 | g36394 | i0 | 100 | 0.160919540229885 | 28 | 0 | 16 | 0 | 4 | 31 | 2912502 | 2912529 | MAG: uncultured Phycisphaerales bacterium isolate MFD01213.bin.c.1 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | uncultured Phycisphaerales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;