RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14803 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21350 21350 PRJEB14803_P_NODE_10341_length_399_cov_4.228022_g9876_i0 PRJEB14803 10341 399 4.228022 16.86980778 Mizuhopecten yessoensis 6573 Mollusca Mollusca 195 5.999999999999999e-45   NTclustered gi|1207937899|ref|XM_021502813.1| 6573 g9876 i0 88.272 16.3057644110276 162 19 41 0 127 288 180 19 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L27a-like (LOC110453724), mRNA blastn 6506 195 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
21408 21408 PRJEB14803_P_NODE_15941_length_301_cov_1.225564_g15475_i0 PRJEB14803 15941 301 1.225564 3.68894764 Patella vulgata 6465 Mollusca Mollusca 267 9.19e-67   NTclustered gi|2506322976|ref|XM_050547475.2| 6465 g15475 i0 82.943 88.7209302325581 299 47 99 4 5 301 952 656 PREDICTED: Patella vulgata actin, cytoplasmic (LOC126819440), mRNA blastn 26705 267 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
1295688 1295688 PRJEB14803_P_NODE_35722_length_177_cov_2.288732_g35256_i0 PRJEB14803 35722 177 2.288732 4.05105564 Littorina saxatilis 31220 Mollusca Mollusca 178 2.36e-40   NTclustered gi|2868620438|ref|XM_070341178.1| 31220 g35256 i0 87.662 6.72881355932203 154 17 86 2 25 177 2086 1934 PREDICTED: Littorina saxatilis ribonucleoside-diphosphate reductase large subunit-like (LOC138968587), mRNA blastn 1191 178 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
1295749 1295749 PRJEB14803_P_NODE_47602_length_150_cov_1.043478_g47136_i0 PRJEB14803 47602 150 1.043478 1.565217 Pecten maximus 6579 Mollusca Mollusca 56.5 0.001   NTclustered gi|1835448179|ref|XM_033874351.1| 6579 g47136 i0 92.308 1.74 39 3 26 0 45 83 1581 1543 PREDICTED: Pecten maximus FK506-binding protein 3-like (LOC117319563), mRNA blastn 261 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
2571246 2571246 PRJEB14803_P_NODE_16443_length_295_cov_1.376923_g15977_i0 PRJEB14803 16443 295 1.376923 4.06192285 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g15977 i0 100 0.101694915254237 30 0 10 0 135 164 24530829 24530858 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
2571287 2571287 PRJEB14803_P_NODE_22343_length_240_cov_2.209756_g21877_i0 PRJEB14803 22343 240 2.209756 5.3034144 Meretrix lamarckii 157363 Mollusca Mollusca 69.4 2.14e-7   NTclustered gi|530538256|gb|KF195947.1| 157363 g21877 i0 87.931 0.241666666666667 58 7 24 0 178 235 220 277 Meretrix lamarckii strain CN clone isotig00210 microsatellite sequence blastn 58 69.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Meretrix Meretrix lamarckii
3536394 3536394 PRJEB14803_P_NODE_2243_length_958_cov_2.187432_g1972_i0 PRJEB14803 2243 958 2.187432 20.95559856 Opisthokonta 33154 Mollusca Mollusca 56.5 0.007   NTclustered gi|2911850250|ref|XM_071252257.1| 6455 g1972 i0 96.97 1.58141962421712 33 1 3 0 216 248 539 507 PREDICTED: Haliotis cracherodii uncharacterized protein (LOC139469910), transcript variant X2, mRNA blastn 1515 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis cracherodii
3536413 3536413 PRJEB14803_P_NODE_44283_length_156_cov_1.322314_g43817_i0 PRJEB14803 44283 156 1.322314 2.06280984 Haliotis 6452 Mollusca Mollusca 139 9.59e-29   NTclustered gi|2245695757|ref|XM_046504906.2| 6454 g43817 i0 86.508 13.224358974359 126 17 81 0 1 126 267 142 PREDICTED: Haliotis rufescens ras-related C3 botulinum toxin substrate 1 (LOC124138314), mRNA blastn 2063 139 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
3847718 3847718 PRJEB14803_P_NODE_44984_length_155_cov_0.991667_g44518_i0 PRJEB14803 44984 155 0.991667 1.53708385 Pomacea canaliculata 400727 Mollusca Mollusca 52.8 0.013   NTclustered gi|1397715295|ref|XM_025248849.1| 400727 g44518 i0 100 0.180645161290323 28 0 18 0 10 37 1939 1912 PREDICTED: Pomacea canaliculata mucin-12-like (LOC112570437), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
5123779 5123779 PRJEB14803_P_NODE_15465_length_307_cov_1.617647_g14999_i0 PRJEB14803 15465 307 1.617647 4.96617629 Patella vulgata 6465 Mollusca Mollusca 172 2.1099999999999998e-38   NTclustered gi|2506319164|ref|XM_050543279.2| 6465 g14999 i0 77.023 2.79478827361564 309 65 99 6 1 306 398 703 PREDICTED: Patella vulgata calmodulin-A (LOC126816592), mRNA blastn 858 172 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
5123812 5123812 PRJEB14803_P_NODE_20985_length_251_cov_0.879630_g20519_i0 PRJEB14803 20985 251 0.87963 2.2078713 Littorina saxatilis 31220 Mollusca Mollusca 147 1.01e-30   NTclustered gi|2868615721|ref|XM_070343274.1| 31220 g20519 i0 79.621 32.3187250996016 211 38 83 5 42 249 67 275 PREDICTED: Littorina saxatilis large ribosomal subunit protein uL15-like (LOC138970765), transcript variant X1, mRNA blastn 8112 147 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
5123871 5123871 PRJEB14803_P_NODE_30445_length_196_cov_1.472050_g29979_i0 PRJEB14803 30445 196 1.47205 2.885218 Pecten maximus 6579 Mollusca Mollusca 185 1.6e-42   NTclustered gi|1835454408|ref|XM_033892545.1| 6579 g29979 i0 83.938 56.8571428571429 193 31 98 0 1 193 262 454 PREDICTED: Pecten maximus dynein light chain 2, cytoplasmic (LOC117333308), mRNA blastn 11144 185 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
6399574 6399574 PRJEB14803_P_NODE_24226_length_228_cov_1.088083_g23760_i0 PRJEB14803 24226 228 1.088083 2.48082924 Bradybaena similaris 145626 Mollusca Mollusca 56.5 0.002   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g23760 i0 100 0.254385964912281 30 0 13 0 199 228 3976662 3976633 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
7673708 7673708 PRJEB14803_P_NODE_34067_length_183_cov_1.081081_g33601_i0 PRJEB14803 34067 183 1.081081 1.97837823 Aplysia californica 6500 Mollusca Mollusca 104 4.24e-18   NTclustered gi|1897944466|ref|XR_001185434.2| 6500 g33601 i0 89.157 2.90163934426229 83 9 45 0 11 93 109 191 PREDICTED: Aplysia californica uncharacterized LOC101850620 (LOC101850620), ncRNA blastn 531 104 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
8948609 8948609 PRJEB14803_P_NODE_9528_length_421_cov_2.113990_g9064_i0 PRJEB14803 9528 421 2.11399 8.8998979 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.041   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g9064 i0 100 0.0665083135391924 28 0 7 0 357 384 15301092 15301065 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
10224125 10224125 PRJEB14803_P_NODE_19389_length_264_cov_2.266376_g18923_i0 PRJEB14803 19389 264 2.266376 5.98323264 Pecten maximus 6579 Mollusca Mollusca 65.8 3.1e-6   NTclustered gi|1835485072|ref|XM_033899972.1| 6579 g18923 i0 90.385 3.07954545454545 52 1 19 3 54 102 516 566 PREDICTED: Pecten maximus coiled-coil domain-containing protein 1-like (LOC117338614), mRNA blastn 813 65.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
12774991 12774991 PRJEB14803_P_NODE_2091_length_995_cov_4.160417_g1835_i0 PRJEB14803 2091 995 4.160417 41.39614915 Littorina saxatilis 31220 Mollusca Mollusca 122 7.579999999999999e-23   NTclustered gi|2868659100|ref|XM_070332305.1| 31220 g1835 i0 82.051 5.29346733668342 156 16 21 6 1 147 6154 6002 PREDICTED: Littorina saxatilis obscurin-like (LOC138960402), transcript variant X2, mRNA blastn 5267 122 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
12775131 12775131 PRJEB14803_P_NODE_5491_length_589_cov_5.651625_g5083_i0 PRJEB14803 5491 589 5.651625 33.28807125 Mercenaria mercenaria 6596 Mollusca Mollusca 320 1.45e-82   NTclustered gi|2442058763|ref|XM_045347307.2| 6596 g5083 i0 79.909 68.5959252971138 438 86 74 2 72 508 635 199 PREDICTED: Mercenaria mercenaria uncharacterized LOC123556531 (LOC123556531), mRNA blastn 40403 320 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
13739240 13739240 PRJEB14803_P_NODE_15531_length_306_cov_2.025830_g15065_i0 PRJEB14803 15531 306 2.02583 6.1990398 Metazoa 33208 Mollusca Mollusca 54.7 0.008   NTclustered gi|2442072741|ref|XM_053547266.1| 6596 g15065 i0 100 0.189542483660131 29 0 9 0 104 132 51 23 PREDICTED: Mercenaria mercenaria phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1-like (LOC123553948), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
14049671 14049671 PRJEB14803_P_NODE_47332_length_150_cov_1.713043_g46866_i0 PRJEB14803 47332 150 1.713043 2.5695645 Mytilus edulis 6550 Mollusca Mollusca 56.5 0.001   NTclustered gi|2912336297|ref|XM_071281312.1| 6550 g46866 i0 96.97 0.44 33 1 22 0 74 106 1312 1280 PREDICTED: Mytilus edulis golgin subfamily A member 6-like protein 25 (LOC139493140), transcript variant X2, mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
15323594 15323594 PRJEB14803_P_NODE_25053_length_222_cov_3.470588_g24587_i0 PRJEB14803 25053 222 3.470588 7.70470536 Patella vulgata 6465 Mollusca Mollusca 230 8.48e-56   NTclustered gi|2506322979|ref|XM_050547474.2| 6465 g24587 i0 85.714 48.6981981981982 217 31 98 0 1 217 992 776 PREDICTED: Patella vulgata actin, cytoplasmic (LOC126819439), mRNA blastn 10811 230 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
15323699 15323699 PRJEB14803_P_NODE_47253_length_150_cov_2.086957_g46787_i0 PRJEB14803 47253 150 2.086957 3.1304355 Mizuhopecten yessoensis 6573 Mollusca Mollusca 99 1.55e-16   NTclustered gi|1207937899|ref|XM_021502813.1| 6573 g46787 i0 86.022 40.7466666666667 93 11 61 2 1 92 124 215 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L27a-like (LOC110453724), mRNA blastn 6112 99 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
16598301 16598301 PRJEB14803_P_NODE_30374_length_196_cov_1.944099_g29908_i0 PRJEB14803 30374 196 1.944099 3.81043404 Aplysia californica 6500 Mollusca Mollusca 67.6 6.05e-7   NTclustered gi|1897933400|ref|XM_005104373.3| 6500 g29908 i0 76.19 1.11734693877551 168 17 80 16 18 173 664 508 PREDICTED: Aplysia californica histone H1-delta-like (LOC101848903), mRNA blastn 219 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
19146872 19146872 PRJEB14803_P_NODE_15236_length_310_cov_1.512727_g14770_i0 PRJEB14803 15236 310 1.512727 4.6894537 Littorina saxatilis 31220 Mollusca Mollusca 63.9 1.34e-5   NTclustered gi|2868649255|ref|XM_070316977.1| 31220 g14770 i0 87.719 0.67741935483871 57 3 18 3 23 78 1399 1452 PREDICTED: Littorina saxatilis NF-kappa-B-activating protein-like (LOC138945537), transcript variant X2, mRNA blastn 210 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
20422105 20422105 PRJEB14803_P_NODE_19057_length_267_cov_2.112069_g18591_i0 PRJEB14803 19057 267 2.112069 5.63922423 Pomacea canaliculata 400727 Mollusca Mollusca 52.8 0.024   NTclustered gi|1397735550|ref|XM_025259172.1| 400727 g18591 i0 100 0.104868913857678 28 0 10 0 184 211 3866 3839 PREDICTED: Pomacea canaliculata zinc finger protein 423-like (LOC112576594), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
20422194 20422194 PRJEB14803_P_NODE_35457_length_178_cov_1.776224_g34991_i0 PRJEB14803 35457 178 1.776224 3.16167872 Mizuhopecten yessoensis 6573 Mollusca Mollusca 132 1.88e-26   NTclustered gi|1207980043|ref|XM_021483868.1| 6573 g34991 i0 80.226 26.7921348314607 177 33 99 2 3 178 398 223 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L10-like (LOC110440716), mRNA blastn 4769 132 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
20422290 20422290 PRJEB14803_P_NODE_8617_length_448_cov_5.154964_g8156_i0 PRJEB14803 8617 448 5.154964 23.09423872 Mytilus edulis 6550 Mollusca Mollusca 331 4.98e-86   NTclustered gi|2912379378|ref|XM_071301938.1| 6550 g8156 i0 87.241 63.3571428571429 290 37 65 0 159 448 1548 1259 PREDICTED: Mytilus edulis tubulin alpha-1A chain (LOC139513450), mRNA blastn 28384 331 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
21698297 21698297 PRJEB14803_P_NODE_7738_length_479_cov_2.371622_g7281_i0 PRJEB14803 7738 479 2.371622 11.36006938 Aplysia californica 6500 Mollusca Mollusca 289 3.27e-73   NTclustered gi|1897919841|ref|XM_013080763.2| 6500 g7281 i0 78.889 89.482254697286 450 77 92 17 7 447 502 62 PREDICTED: Aplysia californica 40S ribosomal protein S18 (LOC101863011), mRNA blastn 42862 289 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
22973302 22973302 PRJEB14803_P_NODE_10839_length_387_cov_1.590909_g10374_i0 PRJEB14803 10839 387 1.590909 6.15681783 Lottia gigantea 225164 Mollusca Mollusca 54.7 0.01   NTclustered gi|676443756|ref|XM_009051963.1| 225164 g10374 i0 96.97 0.0852713178294574 33 0 9 1 76 108 1370 1401 Lottia gigantea hypothetical protein partial mRNA blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
24247287 24247287 PRJEB14803_P_NODE_30340_length_196_cov_2.211180_g29874_i0 PRJEB14803 30340 196 2.21118 4.3339128 Mya arenaria 6604 Mollusca Mollusca 187 4.4499999999999985e-43   NTclustered gi|2427441888|ref|XM_052905672.1| 6604 g29874 i0 92.424 60.9183673469388 132 9 67 1 66 196 1514 1383 PREDICTED: Mya arenaria tubulin alpha-1A chain-like (LOC128204264), mRNA blastn 11940 187 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;