RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

41 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 41 ✖

tax_kingdom 1

bioproject 1

  • PRJEB14803 · 41 ✖

analysis 1

  • blastn · 41 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21589 21589 PRJEB14803_P_NODE_61_length_3065_cov_15.387459_g51_i0 PRJEB14803 61 3065 15.387459 471.62561835 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 4815 0   NTclustered gi|377832930|gb|JN605449.1| 28875 g51 i0 99.734 84.6642740619902 2628 7 86 0 37 2664 2744 117 Rotavirus A strain MRC-DPRU2427 segment 2, complete sequence blastn 259496 4815 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
2261117 2261117 PRJEB14803_P_NODE_802_length_1479_cov_57.583795_g87_i4 PRJEB14803 802 1479 57.583795 851.66432805 Rotavirus 10912 Viruses Viruses 1467 0   NTclustered gi|1893169305|gb|MT232620.1| 10941 g87 i4 99.382 99.764029749831 809 5 100 0 671 1479 3302 2494 Human rotavirus A strain RVA/Human-wt/USA/2012748260/2012/G8P[4] RNA-dependent RNA polymerase VP1 (VP1) gene, complete cds blastn 147551 1478 0.99255751014885 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
2571195 2571195 PRJEB14803_P_NODE_103_length_2743_cov_54.184269_g87_i0 PRJEB14803 103 2743 54.184269 1486.27449867 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 5016 0   NTclustered gi|2072720453|gb|MZ094359.1| 28875 g87 i0 99.672 99.9690120306234 2743 9 100 0 1 2743 3091 349 Rotavirus A isolate RVA/Human-wt/KEN/KLF0621/2012/G8P[4] VP1 protein gene, partial cds blastn 274215 5016 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
3536407 3536407 PRJEB14803_P_NODE_363_length_1921_cov_13.474549_g299_i0 PRJEB14803 363 1921 13.474549 258.84608629 Rotavirus 10912 Viruses Viruses 1712 0   NTclustered gi|1622319249|gb|MH291280.1| 10941 g299 i0 99.365 98.7293076522645 945 6 98 0 977 1921 981 37 Human rotavirus A strain RVA/Human-wt/KEN/3413/2016/G1P[8] VP7 gene, complete cds blastn 189659 1724 0.993039443155452 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
4813624 4813624 PRJEB14803_P_NODE_104_length_2743_cov_53.112999_g87_i1 PRJEB14803 104 2743 53.112999 1456.88956257 Rotavirus 10912 Viruses Viruses 4867 0   NTclustered gi|1893169305|gb|MT232620.1| 10941 g87 i1 98.688 100 2743 36 100 0 1 2743 397 3139 Human rotavirus A strain RVA/Human-wt/USA/2012748260/2012/G8P[4] RNA-dependent RNA polymerase VP1 (VP1) gene, complete cds blastn 274300 4911 0.991040521278762 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
4813635 4813635 PRJEB14803_P_NODE_2064_length_999_cov_17.066390_g1810_i0 PRJEB14803 2064 999 17.06639 170.4932361 Rotavirus 10912 Viruses Viruses 1801 0   NTclustered gi|1150186425|gb|KU738580.1| 10941 g1810 i0 99.199 99.7827827827828 999 8 100 0 1 999 1061 63 Human rotavirus A strain S2/NIV 1044603 NSP3 gene, complete cds blastn 99683 1801 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
7363491 7363491 PRJEB14803_P_NODE_186_length_2390_cov_13.189384_g160_i0 PRJEB14803 186 2390 13.189384 315.2262776 Rotavirus 10912 Viruses Viruses 4239 0   NTclustered gi|1886952604|gb|MT854853.1| 10941 g160 i0 99.57 96.9016736401674 2326 9 97 1 50 2375 2325 1 Human rotavirus A strain RVA/Human-wt/ZAF/UFS-NGS-MRC-DPRU1980/2008/G1P[8] outer capsid spike protein VP4 (VP4) gene, partial cds blastn 231595 4259 0.995304061986382 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
7363522 7363522 PRJEB14803_P_NODE_5586_length_584_cov_4.531876_g5174_i0 PRJEB14803 5586 584 4.531876 26.46615584 Rotavirus 10912 Viruses Viruses 1044 0   NTclustered gi|1083251572|dbj|LC105586.1| 10941 g5174 i0 99.139 99.3921232876712 581 3 99 2 1 580 41 620 Human rotavirus A NSP4 gene for NSP4 protein, complete cds, strain: RVA/Human-wt/GHA/GHPML1989/2012/G2P[4] blastn 58045 1050 0.994285714285714 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
7673569 7673569 PRJEB14803_P_NODE_1307_length_1241_cov_13.818408_g1119_i0 PRJEB14803 1307 1241 13.818408 171.48644328 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 2281 0   NTclustered gi|2554189935|gb|OR205576.1| 28875 g1119 i0 99.839 100 1241 2 100 0 1 1241 1280 40 Rotavirus A isolate RVA/Human-wt/IND/C-1383/2010/G1P[8]I1R1C1M1A1N1T1E1H1 inner capsid protein (VP6) gene, complete cds blastn 124100 2281 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
8638866 8638866 PRJEB14803_P_NODE_227_length_2271_cov_24.896691_g189_i0 PRJEB14803 227 2271 24.896691 565.40385261 Rotavirus 10912 Viruses Viruses 3995 0   NTclustered gi|1241780920|dbj|LC227971.1| 10941 g189 i0 98.754 98.4605900484368 2247 28 99 0 25 2271 2350 104 Human rotavirus A VP4 gene for VP4 protein, complete cds, strain: RVA/Human-wt/IND/Kol-051/2013/G9P[4] blastn 223604 4017 0.994523276076674 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
8638875 8638875 PRJEB14803_P_NODE_2687_length_875_cov_30.053571_g189_i2 PRJEB14803 2687 875 30.053571 262.96874625 Rotavirus 10912 Viruses Viruses 798 0   NTclustered gi|1188454786|dbj|LC105226.1| 10941 g189 i2 98.455 100.964571428571 453 7 100 0 1 453 453 1 Human rotavirus A VP4 gene for VP4 protein, complete cds, strain: RVA/Human-wt/JPN/MU14-22/2014/G2P[4] blastn 88344 804 0.992537313432836 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
8948328 8948328 PRJEB14803_P_NODE_128_length_2616_cov_49.635025_g109_i0 PRJEB14803 128 2616 49.635025 1298.452254 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 4669 0   NTclustered gi|1541453997|dbj|LC406832.1| 28875 g109 i0 99.303 98.0229357798165 2582 18 99 0 35 2616 1 2582 Rotavirus A RVA/Human-wt/KEN/KDH1629/2013/G8P[4] VP3 gene for structural protein VP3, complete cds blastn 256428 4669 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
10224128 10224128 PRJEB14803_P_NODE_1969_length_1024_cov_11.744186_g1721_i0 PRJEB14803 1969 1024 11.744186 120.26046464 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1851 0   NTclustered gi|377832942|gb|JN605455.1| 28875 g1721 i0 99.412 94.615234375 1020 6 99 0 3 1022 1054 35 Rotavirus A strain MRC-DPRU2427 segment 8, complete sequence blastn 96886 1851 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
10224299 10224299 PRJEB14803_P_NODE_6209_length_547_cov_7.820312_g5774_i0 PRJEB14803 6209 547 7.820312 42.77710664 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 963 0   NTclustered gi|2072720005|gb|MZ094135.1| 28875 g5774 i0 99.809 95.2577696526508 524 1 96 0 9 532 528 5 Rotavirus A isolate RVA/Human-wt/KEN/KLF0595/2012/G8P[4] nonstructural protein 4 gene, complete cds blastn 52106 963 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
12775007 12775007 PRJEB14803_P_NODE_231_length_2245_cov_29.483258_g189_i1 PRJEB14803 231 2245 29.483258 661.8991421 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 3910 0   NTclustered gi|1541453999|dbj|LC406833.1| 28875 g189 i1 97.996 100.681959910913 2246 37 99 8 3 2245 2353 113 Rotavirus A RVA/Human-wt/KEN/KDH1629/2013/G8P[4] VP4 gene for structural protein VP4, complete cds blastn 226031 3910 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
12775036 12775036 PRJEB14803_P_NODE_2911_length_842_cov_24.501859_g2599_i0 PRJEB14803 2911 842 24.501859 206.30565278 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1424 0   NTclustered gi|1541454013|dbj|LC406840.1| 28875 g2599 i0 99.743 98.0486935866983 777 2 99 0 3 779 12 788 Rotavirus A RVA/Human-wt/KEN/KDH1629/2013/G8P[4] NSP5 gene for non-structural protein NSP5, complete cds blastn 82557 1424 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
13739285 13739285 PRJEB14803_P_NODE_431_length_1816_cov_12.725435_g299_i1 PRJEB14803 431 1816 12.725435 231.0938996 Rotavirus 10912 Viruses Viruses 1696 0   NTclustered gi|1622319249|gb|MH291280.1| 10941 g299 i1 99.048 99.0534140969163 945 9 98 0 872 1816 981 37 Human rotavirus A strain RVA/Human-wt/KEN/3413/2016/G1P[8] VP7 gene, complete cds blastn 179881 1712 0.990654205607477 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
15323606 15323606 PRJEB14803_P_NODE_273_length_2119_cov_25.842610_g226_i0 PRJEB14803 273 2119 25.84261 547.6049059 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1945 0   NTclustered gi|2412212318|gb|OP717638.1| 28875 g226 i0 99.718 99.0113260972157 1062 3 97 0 33 1094 1062 1 Rotavirus A strain RVA/Human-wt/MWI/BID25P/2014/G2P[4] segment 9, complete sequence blastn 209805 1945 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
15323672 15323672 PRJEB14803_P_NODE_39533_length_167_cov_0.871212_g39067_i0 PRJEB14803 39533 167 0.871212 1.45492404 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 276 7.64e-70   NTclustered gi|1217097570|gb|KX655504.1| 28875 g39067 i0 98.71 92.7005988023952 155 2 93 0 13 167 732 578 Rotavirus A strain RVA/Human-wt/UGA/MUL-13-160/2013/G8P[4] NSP4 (NSP4) mRNA, complete cds blastn 15481 276 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
15323704 15323704 PRJEB14803_P_NODE_5033_length_620_cov_16.326496_g4632_i0 PRJEB14803 5033 620 16.326496 101.2242752 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1037 0   NTclustered gi|1035789232|gb|KU048765.1| 28875 g4632 i0 96.926 99.4225806451613 618 19 99 0 3 620 13 630 Rotavirus A isolate Hu-wt/ITA/PA417/14/2014/G12P8 NSP5 gene, complete cds blastn 61642 1037 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
16288496 16288496 PRJEB14803_P_NODE_3333_length_779_cov_24.576613_g2599_i1 PRJEB14803 3333 779 24.576613 191.45181527 Rotavirus 10912 Viruses Viruses 1354 0   NTclustered gi|1949214494|dbj|LC569518.1| 10941 g2599 i1 98.323 99.4646983311938 775 8 99 1 1 775 770 1 Human rotavirus A RVA/Human-wt/JPN/SU16-02/2016/G2P[4] NSP5 gene for non-structural protein 5, complete cds blastn 77483 1363 0.993396918561996 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17563664 17563664 PRJEB14803_P_NODE_314_length_2019_cov_24.016633_g228_i1 PRJEB14803 314 2019 24.016633 484.89582027 Rotavirus 10912 Viruses Viruses 1960 0   NTclustered gi|1100702201|gb|KU248398.1| 10941 g228 i1 98.995 100.016840019812 1094 11 100 0 926 2019 1356 263 Human rotavirus A strain RVA/Human-wt/BGN/J266/2010/G2P[4] VP6 gene, complete cds blastn 201934 1971 0.994419076610857 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17563700 17563700 PRJEB14803_P_NODE_6514_length_531_cov_3.475806_g6069_i0 PRJEB14803 6514 531 3.475806 18.45652986 Rotavirus 10912 Viruses Viruses 833 0   NTclustered gi|1150186431|gb|KU738583.1| 10941 g6069 i0 99.78 100.751412429379 454 1 100 0 1 454 549 96 Human rotavirus A strain S2/NIV 1044603 NSP4 gene, complete cds blastn 53499 833 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17563705 17563705 PRJEB14803_P_NODE_834_length_1460_cov_9.105965_g196_i2 PRJEB14803 834 1460 9.105965 132.947089 Rotavirus 10912 Viruses Viruses 2558 0   NTclustered gi|1886952612|gb|MT854857.1| 10941 g196 i2 98.288 99.9958904109589 1460 25 100 0 1 1460 2156 697 Human rotavirus A strain RVA/Human-wt/ZAF/UFS-NGS-MRC-DPRU1980/2008/G1P[8] RNA capping protein VP3 (VP3) gene, partial cds blastn 145994 2558 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17872940 17872940 PRJEB14803_P_NODE_115_length_2679_cov_36.455749_g98_i0 PRJEB14803 115 2679 36.455749 976.64951571 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 4861 0   NTclustered gi|788165733|gb|KP752572.1| 28875 g98 i0 99.624 98.2986188876447 2662 10 99 0 18 2679 2684 23 Rotavirus A strain RVA/Human-wt/TZA/MRC-DPRU4570/2011/G8P[4] segment 2 core capsid protein VP2 (VP2) gene, complete cds blastn 263342 4861 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17873021 17873021 PRJEB14803_P_NODE_235_length_2235_cov_11.630909_g196_i0 PRJEB14803 235 2235 11.630909 259.95081615 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 3989 0   NTclustered gi|1035788627|gb|KU048580.1| 28875 g196 i0 99.32 97.6796420581655 2206 14 99 1 1 2206 2205 1 Rotavirus A isolate Hu-wt/ITA/PA417/14/2014/G12P8 VP3 gene, complete cds blastn 218314 3989 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
17873094 17873094 PRJEB14803_P_NODE_355_length_1936_cov_39.754866_g291_i0 PRJEB14803 355 1936 39.754866 769.65420576 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1893 0   NTclustered gi|1541453965|dbj|LC406816.1| 28875 g291 i0 99.237 100.184917355372 1049 8 100 0 888 1936 1 1049 Rotavirus A RVA/Human-wt/KEN/KDH1111/2011/G8P[4] NSP3 gene for non-structural protein NSP3, complete cds blastn 193958 1893 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
18837594 18837594 PRJEB14803_P_NODE_23035_length_235_cov_1.845000_g22569_i0 PRJEB14803 23035 235 1.845 4.33575 Rotavirus 10912 Viruses Viruses 374 3.9599999999999985e-99   NTclustered gi|1503246274|gb|MH402457.1| 10941 g22569 i0 98.14 91.4893617021277 215 2 91 2 23 235 457 243 Human rotavirus A isolate KEN/0755/2015 VP7 (G) gene, partial cds blastn 21500 374 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
18837608 18837608 PRJEB14803_P_NODE_3255_length_791_cov_11.948413_g2921_i0 PRJEB14803 3255 791 11.948413 94.51194683 Rotavirus 10912 Viruses Viruses 1227 0   NTclustered gi|1861660573|dbj|LC468215.1| 10941 g2921 i0 97.241 91.9823008849557 725 19 92 1 30 754 1 724 Human rotavirus A RVA/Human-wt/JPN/Ro1847/2013/G1P[8] VP3 gene for structural protein VP3, complete cds blastn 72758 1238 0.991114701130856 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
19146927 19146927 PRJEB14803_P_NODE_23416_length_232_cov_30.096447_g22950_i0 PRJEB14803 23416 232 30.096447 69.82375704 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 429 8.2e-116   NTclustered gi|2072726159|gb|MZ097185.1| 28875 g22950 i0 100 100 232 0 100 0 1 232 856 625 Rotavirus A isolate RVA/Human-wt/KEN/KLF1056/2012/G8P[4] nonstructural protein 1 gene, complete cds blastn 23200 429 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
20112361 20112361 PRJEB14803_P_NODE_276_length_2110_cov_25.155663_g228_i0 PRJEB14803 276 2110 25.155663 530.7844893 Rotavirus 10912 Viruses Viruses 2134 0   NTclustered gi|380849658|gb|JQ043294.1| 10941 g228 i0 99.074 100.012796208531 1188 11 100 0 923 2110 1 1188 Human rotavirus A strain CMH030/07 capsid protein VP6 (VP6) gene, complete cds blastn 211027 2139 0.997662459093034 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
20112364 20112364 PRJEB14803_P_NODE_316_length_2017_cov_18.567104_g258_i0 PRJEB14803 316 2017 18.567104 374.49848768 Rotavirus 10912 Viruses Viruses 1788 0   NTclustered gi|1893169313|gb|MT232624.1| 10941 g258 i0 98.146 100.053049082796 1025 19 100 0 1 1025 35 1059 Human rotavirus A strain RVA/Human-wt/USA/2012748260/2012/G8P[4] nonstructural protein 2 (NSP2) gene, complete cds blastn 201807 1799 0.993885491939967 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
20422111 20422111 PRJEB14803_P_NODE_2017_length_1011_cov_21.925205_g1768_i0 PRJEB14803 2017 1011 21.925205 221.66382255 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1868 0   NTclustered gi|1541454003|dbj|LC406835.1| 28875 g1768 i0 100 98.0880316518299 1011 0 100 0 1 1011 1049 39 Rotavirus A RVA/Human-wt/KEN/KDH1629/2013/G8P[4] VP7 gene for structural protein VP7, complete cds blastn 99167 1868 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
21387917 21387917 PRJEB14803_P_NODE_23417_length_232_cov_18.233503_g22951_i0 PRJEB14803 23417 232 18.233503 42.30172696 Rotavirus 10912 Viruses Viruses 429 8.2e-116   NTclustered gi|1622319131|gb|MH301234.1| 10941 g22951 i0 100 100 232 0 100 0 1 232 856 625 Human rotavirus A strain RVA/Human-wt/KEN/3946/2017/G2/G3P[4]/6a non-structural protein 1 gene, complete cds blastn 23200 429 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
21387936 21387936 PRJEB14803_P_NODE_37_length_3236_cov_7.978444_g30_i0 PRJEB14803 37 3236 7.978444 258.18244784 Rotavirus 10912 Viruses Viruses 5668 0   NTclustered gi|1886953400|gb|MT855251.1| 10941 g30 i0 98.958 100.079728059333 3168 33 99 0 4 3171 1 3168 Human rotavirus A strain RVA/Human-wt/ZAF/UFS-NGS-MRC-DPRU65/2014/G1P[8] RNA-dependent RNA polymerase VP1 (VP1) gene, partial cds blastn 323858 5718 0.991255683805526 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
21698117 21698117 PRJEB14803_P_NODE_238_length_2231_cov_49.583333_g87_i2 PRJEB14803 238 2231 49.583333 1106.20415923 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 4071 0   NTclustered gi|2072719909|gb|MZ094087.1| 28875 g87 i2 99.641 99.8027790228597 2228 8 99 0 1 2228 2228 1 Rotavirus A isolate RVA/Human-wt/KEN/KLF0587/2012/G8P[4] VP1 protein gene, complete cds blastn 222660 4071 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
22662766 22662766 PRJEB14803_P_NODE_6298_length_542_cov_6.284024_g5858_i0 PRJEB14803 6298 542 6.284024 34.05941008 Rotavirus 10912 Viruses Viruses 470 1.24e-127   NTclustered gi|2726419539|dbj|LC751497.1| 10941 g5858 i0 98.141 91.3892988929889 269 5 89 0 245 513 269 1 Human rotavirus A RVA/Human-wt/JPN/To18-01/2018/G1P[8]-E2 RNA, segment 3, almost complete sequence blastn 49533 470 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
22973557 22973557 PRJEB14803_P_NODE_79_length_2874_cov_26.154632_g67_i0 PRJEB14803 79 2874 26.154632 751.68412368 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 2676 0   NTclustered gi|2577275633|gb|OR168225.1| 28875 g67 i0 99.192 66.7981906750174 1485 12 76 0 686 2170 10 1494 Rotavirus A isolate RVA/Human-wt/IND/LBF-6279/2011/G1P[8]I1R1C1M1A1N1T1E1H1 interferon antagonist (NSP1) gene, complete cds blastn 191978 2676 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
22973560 22973560 PRJEB14803_P_NODE_819_length_1473_cov_10.256606_g196_i1 PRJEB14803 819 1473 10.256606 151.07980638 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 1365 0   NTclustered gi|75994339|gb|DQ146651.1| 28875 g196 i1 97.73 100.294636795655 793 18 100 0 1 793 1772 2564 Rotavirus A strain RVA/Human-wt/BGD/Dhaka25/2002/G12P[8] VP3 gene, complete cds blastn 147734 1365 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
23938164 23938164 PRJEB14803_P_NODE_239_length_2231_cov_48.938525_g87_i3 PRJEB14803 239 2231 48.938525 1091.81849275 Rotavirus 10912 Viruses Viruses 3888 0   NTclustered gi|1893169305|gb|MT232620.1| 10941 g87 i3 98.117 99.8301210219633 2231 42 100 0 1 2231 2246 16 Human rotavirus A strain RVA/Human-wt/USA/2012748260/2012/G8P[4] RNA-dependent RNA polymerase VP1 (VP1) gene, complete cds blastn 222721 3921 0.991583779648049 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
25211882 25211882 PRJEB14803_P_NODE_3400_length_772_cov_25.553596_g2599_i2 PRJEB14803 3400 772 25.553596 197.27376112 Rotavirus 10912 Viruses Viruses 1384 0   NTclustered gi|906411847|gb|KP007158.1| 10941 g2599 i2 99.091 99.6502590673575 770 7 99 0 3 772 13 782 Human rotavirus A strain RVA/Human-wt/PHI/TGO12-003/2012/G2P[4] nonstructural protein (NSP5) and nonstructural protein (NSP6) genes, complete cds blastn 76930 1384 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;