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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 16 ✖

bioproject 1

  • PRJEB14803 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21487 21487 PRJEB14803_P_NODE_29401_length_200_cov_1.939394_g28935_i0 PRJEB14803 29401 200 1.939394 3.878788 Chlamydomonas reinhardtii 3055 Plants Plants 93.5 1.02e-14   NTclustered gi|2082239806|ref|XM_001699906.2| 3055 g28935 i0 77.64 0.805 161 30 79 5 6 163 754 597 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g107850v5), mRNA blastn 161 93.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1295795 1295795 PRJEB14803_P_NODE_8842_length_442_cov_1.476658_g8380_i0 PRJEB14803 8842 442 1.476658 6.52682836 Auxenochlorella protothecoides 3075 Plants Plants 244 6.57e-60   NTclustered gi|760445070|ref|XM_011401302.1| 3075 g8380 i0 94.872 35.9773755656109 156 8 35 0 287 442 7821 7976 Auxenochlorella protothecoides Pre-mRNA-processing-splicing factor 8 partial mRNA blastn 15902 244 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
2571302 2571302 PRJEB14803_P_NODE_25123_length_222_cov_1.689840_g24657_i0 PRJEB14803 25123 222 1.68984 3.7514448 Chlamydomonas reinhardtii 3055 Plants Plants 141 4.09e-29   NTclustered gi|2082259434|ref|XM_001700488.2| 3055 g24657 i0 85.106 7.42342342342342 141 17 63 4 3 141 2526 2388 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g492950v5), mRNA blastn 1648 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5123916 5123916 PRJEB14803_P_NODE_40405_length_164_cov_1.961240_g39939_i0 PRJEB14803 40405 164 1.96124 3.2164336 Coccomyxa subellipsoidea 248742 Plants Plants 163 6.06e-36   NTclustered gi|545363001|ref|XM_005646641.1| 574566 g39939 i0 84.663 84.2012195121951 163 25 99 0 1 163 5875 5713 Coccomyxa subellipsoidea C-169 Not1-domain-containing protein partial mRNA blastn 13809 163 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
5123950 5123950 PRJEB14803_P_NODE_47025_length_151_cov_1.051724_g46559_i0 PRJEB14803 47025 151 1.051724 1.58810324 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 111 2e-20   NTclustered gi|635557420|emb|FN984965.1| 37502 g46559 i0 80.986 1.2317880794702 142 25 93 2 1 141 1314 1454 Polytomella sp. Pringsheim 198.80 mRNA for S-Adenosyl homocysteine hydrolase (sah1 gene) blastn 186 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
6399577 6399577 PRJEB14803_P_NODE_24446_length_226_cov_1.879581_g23980_i0 PRJEB14803 24446 226 1.879581 4.24785306 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 113 9.1e-21   NTclustered gi|402244316|emb|FR686759.1| 37502 g23980 i0 93.421 0.336283185840708 76 5 34 0 29 104 1084 1159 Polytomella sp. Pringsheim 198.80 mRNA for 40S ribosomal protein L3 (rpl3 gene) blastn 76 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
6399689 6399689 PRJEB14803_P_NODE_5386_length_596_cov_7.119430_g4980_i0 PRJEB14803 5386 596 7.11943 42.4318028 Auxenochlorella protothecoides 3075 Plants Plants 339 4.04e-88   NTclustered gi|760443288|ref|XM_011400411.1| 3075 g4980 i0 81.05 65.1979865771812 438 71 72 11 72 503 441 10 Auxenochlorella protothecoides Ubiquitin-conjugating enzyme E2 28 partial mRNA blastn 38858 339 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
7673848 7673848 PRJEB14803_P_NODE_9607_length_419_cov_2.044271_g9143_i0 PRJEB14803 9607 419 2.044271 8.56549549 Monoraphidium neglectum 145388 Plants Plants 211 6.29e-50   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g9143 i0 79.73 20.4773269689737 296 56 70 3 19 312 363 70 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 8580 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
11499601 11499601 PRJEB14803_P_NODE_7350_length_493_cov_1.914847_g6896_i0 PRJEB14803 7350 493 1.914847 9.44019571 Chlamydomonas reinhardtii 3055 Plants Plants 196 2.1e-45   NTclustered gi|2082236188|ref|XM_043058392.1| 3055 g6896 i0 80.37 20.4807302231237 270 43 55 1 1 270 5385 5644 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g016050v5), mRNA blastn 10097 196 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11499607 11499607 PRJEB14803_P_NODE_7570_length_485_cov_2.346667_g7114_i0 PRJEB14803 7570 485 2.346667 11.38133495 Monoraphidium neglectum 145388 Plants Plants 56.5 0.004   NTclustered gi|926797582|ref|XM_014050761.1| 145388 g7114 i0 100 0.0618556701030928 30 0 6 0 426 455 914 943 Monoraphidium neglectum hypothetical protein mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
14049619 14049619 PRJEB14803_P_NODE_37432_length_172_cov_2.094891_g36966_i0 PRJEB14803 37432 172 2.094891 3.60321252 Chlamydomonas reinhardtii 3055 Plants Plants 99 1.83e-16   NTclustered gi|1214357917|gb|KY555127.1| 3055 g36966 i0 84.158 1.17441860465116 101 16 59 0 58 158 481 381 Chlamydomonas reinhardtii strain CC-503 cw92 mt+ heat shock protein 90B (HSP90B) mRNA, complete cds blastn 202 99 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16288482 16288482 PRJEB14803_P_NODE_2133_length_984_cov_2.935722_g1872_i0 PRJEB14803 2133 984 2.935722 28.88750448 Eukaryota 2759 Plants Plants 970 0   NTclustered gi|2082244282|ref|XM_001703058.2| 3055 g1872 i0 85.56 89.6727642276423 928 132 94 2 58 984 555 1481 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g216850v5), mRNA blastn 88238 970 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21698183 21698183 PRJEB14803_P_NODE_33018_length_186_cov_1.966887_g32552_i0 PRJEB14803 33018 186 1.966887 3.65840982 Chlorella variabilis 554065 Plants Plants 139 1.19e-28   NTclustered gi|552825446|ref|XM_005846766.1| 554065 g32552 i0 84.892 6.2741935483871 139 19 74 2 29 166 1207 1344 Chlorella variabilis hypothetical protein (CHLNCDRAFT_24676) mRNA, complete cds blastn 1167 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
21698202 21698202 PRJEB14803_P_NODE_37598_length_172_cov_1.306569_g37132_i0 PRJEB14803 37598 172 1.306569 2.24729868 Chlorella variabilis 554065 Plants Plants 52.8 0.014   NTclustered gi|552827897|ref|XM_005847271.1| 554065 g37132 i0 96.875 0.186046511627907 32 0 19 1 113 144 916 946 Chlorella variabilis hypothetical protein (CHLNCDRAFT_134505) mRNA, complete cds blastn 32 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
21698272 21698272 PRJEB14803_P_NODE_6078_length_555_cov_1.759615_g5645_i0 PRJEB14803 6078 555 1.759615 9.76586325 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.015   NTclustered gi|2082241375|ref|XM_043060475.1| 3055 g5645 i0 94.444 0.0648648648648649 36 1 6 1 134 168 3765 3800 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g148050v5), mRNA blastn 36 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22973441 22973441 PRJEB14803_P_NODE_32459_length_188_cov_2.091503_g31993_i0 PRJEB14803 32459 188 2.091503 3.93202564 Chlorella variabilis 554065 Plants Plants 110 9.43e-20   NTclustered gi|552826563|ref|XM_005846994.1| 554065 g31993 i0 83.471 1.32978723404255 121 16 63 3 1 119 2557 2439 Chlorella variabilis hypothetical protein (CHLNCDRAFT_56190) mRNA, complete cds blastn 250 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;