RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB14803" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJEB14803 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21378 21378 PRJEB14803_P_NODE_12841_length_346_cov_2.906752_g12376_i0 PRJEB14803 12841 346 2.906752 10.05736192 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.033   NTclustered gi|2794937463|ref|XM_067873916.1| 2049356 g12376 i0 100 0.161849710982659 28 0 8 0 273 300 6203 6230 Monocercomonoides exilis uncharacterized protein (MONOS_3889), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
3847544 3847544 PRJEB14803_P_NODE_11804_length_366_cov_2.392749_g11339_i0 PRJEB14803 11804 366 2.392749 8.75746134 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 62.1 5.77e-5   NTclustered gi|154411722|ref|XM_001578846.1| 412133 g11339 i0 92.857 0.311475409836066 42 3 11 0 322 363 486 445 Trichomonas vaginalis G3 RNA polymerase II transcription regulator recruiting protein (TVAGG3_0288500), partial mRNA blastn 114 62.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
8948539 8948539 PRJEB14803_P_NODE_45548_length_153_cov_2.364407_g45082_i0 PRJEB14803 45548 153 2.364407 3.61754271 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.013   NTclustered gi|2794941618|ref|XM_067873163.1| 2049356 g45082 i0 100 0.183006535947712 28 0 18 0 25 52 4941 4968 Monocercomonoides exilis Polo-like kinase 1 (MONOS_3181), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
11499544 11499544 PRJEB14803_P_NODE_41290_length_162_cov_1.732283_g40824_i0 PRJEB14803 41290 162 1.732283 2.80629846 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 139 1.01e-28   NTclustered gi|2794868929|ref|XM_067917821.1| 135588 g40824 i0 82.39 47.2839506172839 159 28 98 0 4 162 254 96 Histomonas meleagridis Histone H2A (GO595_004665), partial mRNA blastn 7660 139 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
12775071 12775071 PRJEB14803_P_NODE_35991_length_177_cov_1.105634_g35525_i0 PRJEB14803 35991 177 1.105634 1.95697218 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.004   NTclustered gi|2794973095|ref|XM_067863961.1| 2049356 g35525 i0 94.444 0.203389830508475 36 1 20 1 5 40 227 193 Monocercomonoides exilis uncharacterized protein (MONOS_11432), partial mRNA blastn 36 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
13739269 13739269 PRJEB14803_P_NODE_35371_length_178_cov_3.440559_g34905_i0 PRJEB14803 35371 178 3.440559 6.12419502 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 135 1.4500000000000002e-27   NTclustered gi|339759361|dbj|AB600293.1| 658077 g34905 i0 83.803 63.2022471910112 142 23 80 0 1 142 583 724 Hicanonectes teleskopos gene for translation elongation factor 1 alpha, partial cds, strain: SB blastn 11250 135 1 Eukaryota Metamonada   Fornicata       Hicanonectes Hicanonectes teleskopos
19146857 19146857 PRJEB14803_P_NODE_13316_length_338_cov_1.749175_g12851_i0 PRJEB14803 13316 338 1.749175 5.9122115 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.032   NTclustered gi|2794970769|ref|XM_067871972.1| 2049356 g12851 i0 100 0.0828402366863905 28 0 8 0 100 127 11549 11522 Monocercomonoides exilis putative FYVE zinc finger (MONOS_2077), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
24247251 24247251 PRJEB14803_P_NODE_23540_length_232_cov_1.380711_g23074_i0 PRJEB14803 23540 232 1.380711 3.20324952 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.021   NTclustered gi|2794957752|ref|XM_067873065.1| 2049356 g23074 i0 100 0.120689655172414 28 0 12 0 57 84 3705 3678 Monocercomonoides exilis putative aTP-dependent DNA helicase PcrA (MONOS_3092), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;