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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 25 ✖

tax_clade 1

bioproject 1

  • PRJEB14664 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21154 21154 PRJEB14664_P_NODE_11721_length_216_cov_2.237569_g11591_i0 PRJEB14664 11721 216 2.237569 4.83314904 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 388 1.28e-103   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g11591 i0 99.074 106.601851851852 216 2 100 0 1 216 2179 2394 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 23026 388 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
21173 21173 PRJEB14664_P_NODE_13321_length_198_cov_1.453988_g13191_i0 PRJEB14664 13321 198 1.453988 2.87889624 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 108 3.61e-19   NTclustered gi|813142527|ref|XM_012343931.1| 695850 g13191 i0 90.244 1.08585858585859 82 8 41 0 30 111 1209 1128 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L3 mRNA blastn 215 108 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
21189 21189 PRJEB14664_P_NODE_14621_length_186_cov_1.589404_g14491_i0 PRJEB14664 14621 186 1.589404 2.95629144 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 163 7.04e-36   NTclustered gi|673035777|ref|XM_008873628.1| 157072 g14491 i0 83.146 1.93010752688172 178 30 96 0 8 185 86 263 Aphanomyces invadans hypothetical protein mRNA blastn 359 163 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
21340 21340 PRJEB14664_P_NODE_9401_length_252_cov_2.884793_g9271_i0 PRJEB14664 9401 252 2.884793 7.26967836 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 455 1.49e-123   NTclustered gi|698793876|ref|XR_717098.1| 112090 g9271 i0 99.209 100.043650793651 253 1 100 1 1 252 1869 1617 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 25211 455 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
1295314 1295314 PRJEB14664_P_NODE_10902_length_227_cov_8.989583_g10772_i0 PRJEB14664 10902 227 8.989583 20.40635341 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 375 1.06e-99   NTclustered gi|256009645|gb|GQ374534.1| 112090 g10772 i0 96.476 85.2290748898678 227 8 100 0 1 227 159 385 Aphanomyces astaci strain Gb04 28S ribosomal RNA gene, partial sequence blastn 19347 375 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
1295385 1295385 PRJEB14664_P_NODE_18202_length_160_cov_1.600000_g18072_i0 PRJEB14664 18202 160 1.6 2.56 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 263 5.629999999999999e-66   NTclustered gi|673038061|ref|XM_008874770.1| 157072 g18072 i0 96.25 5.3125 160 6 100 0 1 160 78 237 Aphanomyces invadans 60S ribosomal protein L38 mRNA blastn 850 263 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
2571148 2571148 PRJEB14664_P_NODE_6363_length_327_cov_1.571918_g6233_i0 PRJEB14664 6363 327 1.571918 5.14017186 Phytophthora chrysanthemi 638948 SAR_Eukaryotes SAR_Eukaryotes 268 2.7999999999999998e-67   NTclustered gi|1337859674|gb|MG601089.1| 638948 g6233 i0 82.951 98.1467889908257 305 44 92 8 1 301 14 314 Phytophthora chrysanthemi isolate 201600114 ODA translation elongation factor 1-alpha gene, partial cds blastn 32094 268 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora chrysanthemi
2571176 2571176 PRJEB14664_P_NODE_8683_length_267_cov_1.379310_g8553_i0 PRJEB14664 8683 267 1.37931 3.6827577 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 291 4.76e-74   NTclustered gi|673043756|ref|XM_008877617.1| 157072 g8553 i0 86.617 1.00749063670412 269 29 99 7 1 265 467 202 Aphanomyces invadans hypothetical protein mRNA blastn 269 291 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
5123560 5123560 PRJEB14664_P_NODE_13245_length_199_cov_1.219512_g13115_i0 PRJEB14664 13245 199 1.219512 2.42682888 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 261 2.64e-65   NTclustered gi|698783094|ref|XM_009826289.1| 112090 g13115 i0 94.643 79.9597989949749 168 9 84 0 1 168 331 498 Aphanomyces astaci 40S ribosomal protein S23 mRNA blastn 15912 261 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
5123635 5123635 PRJEB14664_P_NODE_2165_length_625_cov_4.328814_g2054_i0 PRJEB14664 2165 625 4.328814 27.0550875 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 922 0   NTclustered gi|698793876|ref|XR_717098.1| 112090 g2054 i0 97.757 90.7344 535 12 86 0 91 625 2616 2082 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 56709 922 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
6088851 6088851 PRJEB14664_P_NODE_10945_length_227_cov_1.619792_g10815_i0 PRJEB14664 10945 227 1.619792 3.67692784 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 399 6.269999999999998e-107   NTclustered gi|166051677|emb|CU353805.1| 100861 g10815 i0 98.667 100.31718061674 225 3 99 0 3 227 297 73 Aphanomyces euteiches cDNA blastn 22772 399 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7363421 7363421 PRJEB14664_P_NODE_12826_length_203_cov_1.904762_g12696_i0 PRJEB14664 12826 203 1.904762 3.86666686 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 2.24e-16   NTclustered gi|189084639|gb|BT032155.1| 4784 g12696 i0 84.694 7.80788177339902 98 15 48 0 1 98 222 125 Phytophthora capsici clone CBOT141-D08 mRNA sequence blastn 1585 99 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
8948179 8948179 PRJEB14664_P_NODE_18048_length_161_cov_1.269841_g17918_i0 PRJEB14664 18048 161 1.269841 2.04444401 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 104 3.64e-18   NTclustered gi|698776983|ref|XM_009823234.1| 112090 g17918 i0 79.141 29.6645962732919 163 25 96 6 5 159 461 300 Aphanomyces astaci hypothetical protein mRNA blastn 4776 104 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
14049324 14049324 PRJEB14664_P_NODE_17312_length_166_cov_0.977099_g17182_i0 PRJEB14664 17312 166 0.977099 1.62198434 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 163 6.16e-36   NTclustered gi|813171659|ref|XM_012349195.1| 695850 g17182 i0 84.848 23.0421686746988 165 21 98 4 1 163 55 217 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 3825 163 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
15013607 15013607 PRJEB14664_P_NODE_3032_length_520_cov_1.668041_g2912_i0 PRJEB14664 3032 520 1.668041 8.6738132 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 300 1.65e-76   NTclustered gi|327206264|gb|JF414554.1| 143453 g2912 i0 77.316 101.107692307692 529 104 99 11 3 520 1631 1108 Pseudoperonospora cubensis isolate CDM-276 cytochrome c oxidase subunit II (cox2) and cytochrome c oxidase subunit I (cox1) genes, partial cds; mitochondrial blastn 52576 302 0.993377483443709 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Pseudoperonospora Pseudoperonospora cubensis
15323339 15323339 PRJEB14664_P_NODE_14533_length_187_cov_1.578947_g14403_i0 PRJEB14664 14533 187 1.578947 2.95263089 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 196 6.989999999999999e-46   NTclustered gi|698813201|ref|XM_009841328.1| 112090 g14403 i0 85.561 2.77540106951872 187 27 100 0 1 187 366 552 Aphanomyces astaci hypothetical protein mRNA blastn 519 196 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
16598092 16598092 PRJEB14664_P_NODE_4514_length_408_cov_2.828418_g4386_i0 PRJEB14664 4514 408 2.828418 11.53994544 Aphanomyces sp. 1982524 SAR_Eukaryotes SAR_Eukaryotes 749 0   NTclustered gi|1578815424|gb|MK546601.1| 1982524 g4386 i0 99.755 99.781862745098 408 1 100 0 1 408 188 595 Aphanomyces sp. voucher CCIBt4545 large subunit ribosomal RNA gene, partial sequence blastn 40711 749 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces sp.
17563588 17563588 PRJEB14664_P_NODE_13294_length_198_cov_1.815951_g13164_i0 PRJEB14664 13294 198 1.815951 3.59558298 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 130 7.71e-26   NTclustered gi|813182419|ref|XM_012350790.1| 695850 g13164 i0 87.611 1.14141414141414 113 13 57 1 84 196 424 313 Saprolegnia parasitica CBS 223.65 50S ribosomal protein L35Ae mRNA blastn 226 130 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
17563607 17563607 PRJEB14664_P_NODE_2694_length_555_cov_3.038462_g2579_i0 PRJEB14664 2694 555 3.038462 16.8634641 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.001   NTclustered gi|325182092|emb|FR824068.1| 890382 g2579 i0 94.595 0.133333333333333 37 2 7 0 514 550 33969 34005 Albugo laibachii Nc14, genomic contig CONTIG_23_NC14_v4_178735_235 blastn 74 58.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
17872774 17872774 PRJEB14664_P_NODE_14035_length_191_cov_1.929487_g13905_i0 PRJEB14664 14035 191 1.929487 3.68532017 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 267 5.3899999999999993e-67   NTclustered gi|166038943|emb|CU355173.1| 100861 g13905 i0 92.063 83.0942408376963 189 15 99 0 1 189 451 639 Aphanomyces euteiches cDNA blastn 15871 267 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
21387893 21387893 PRJEB14664_P_NODE_7777_length_287_cov_1.876984_g7647_i0 PRJEB14664 7777 287 1.876984 5.38694408 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 108 5.58e-19   NTclustered gi|58202010|gb|AY898628.1| 4787 g7647 i0 75.099 88.2961672473868 253 52 86 10 39 286 1001 755 Phytophthora infestans haplotype IIb mitochondrion, complete genome blastn 25341 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
21697881 21697881 PRJEB14664_P_NODE_14278_length_189_cov_2.000000_g14148_i0 PRJEB14664 14278 189 2 3.78 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 128 2.62e-25   NTclustered gi|166035576|emb|CU354455.1| 100861 g14148 i0 92.222 4.97354497354497 90 7 48 0 1 90 753 842 Aphanomyces euteiches cDNA blastn 940 128 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
21697984 21697984 PRJEB14664_P_NODE_7078_length_305_cov_2.814815_g6948_i0 PRJEB14664 7078 305 2.814815 8.58518575 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 159 1.6299999999999999e-34   NTclustered gi|673051000|ref|XM_008881239.1| 157072 g6948 i0 88.06 12.6262295081967 134 16 44 0 1 134 900 1033 Aphanomyces invadans fructose-bisphosphate aldolase, class II mRNA blastn 3851 159 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
22662681 22662681 PRJEB14664_P_NODE_15098_length_182_cov_1.462585_g14968_i0 PRJEB14664 15098 182 1.462585 2.6619047 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 243 8.559999999999999e-60   NTclustered gi|166051442|emb|CU364545.1| 100861 g14968 i0 92.857 91.7747252747253 168 10 92 1 15 182 508 343 Aphanomyces euteiches cDNA blastn 16703 243 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22973267 22973267 PRJEB14664_P_NODE_779_length_1027_cov_5.848790_g713_i0 PRJEB14664 779 1027 5.84879 60.0670733 Phytophthora novae-guineae 3070859 SAR_Eukaryotes SAR_Eukaryotes 126 6.049999999999999e-24   NTclustered gi|1940379313|gb|MN883605.1| 3070859 g713 i0 77.477 9.27458617332035 222 42 21 7 8 225 828 611 Phytophthora novae-guineae culture ICMP:19637 mitochondrion, complete genome blastn 9525 126 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora novae-guineae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;