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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14664 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21269 21269 PRJEB14664_P_NODE_3521_length_475_cov_5.802273_g3397_i0 PRJEB14664 3521 475 5.802273 27.56079675 Synchytrium microbalum 1806994 Fungi Fungi 466 1.3899999999999997e-126   NTclustered gi|1759154564|ref|XM_031169821.1| 1806994 g3397 i0 85.845 90.8484210526316 438 62 92 0 36 473 7 444 Synchytrium microbalum uncharacterized protein (SmJEL517_g03893), partial mRNA blastn 43153 466 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
2571004 2571004 PRJEB14664_P_NODE_10943_length_227_cov_1.645833_g10813_i0 PRJEB14664 10943 227 1.645833 3.73604091 Polychytrium aggregatum 110093 Fungi Fungi 152 1.94e-32   NTclustered gi|2432132805|ref|XM_053109589.1| 110093 g10813 i0 81.622 1.54625550660793 185 32 81 2 30 213 444 627 Polychytrium aggregatum 50S ribosomal protein L30e-like protein (BJ171DRAFT_490208), mRNA blastn 351 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6399369 6399369 PRJEB14664_P_NODE_2206_length_618_cov_14.701544_g2094_i0 PRJEB14664 2206 618 14.701544 90.85554192 Synchytrium microbalum 1806994 Fungi Fungi 359 3.22e-94   NTclustered gi|1759163857|ref|XM_031171354.1| 1806994 g2094 i0 87.342 102.84142394822 316 36 51 4 305 618 2936 2623 Synchytrium microbalum uncharacterized protein (SmJEL517_g05428), partial mRNA blastn 63556 359 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
7673333 7673333 PRJEB14664_P_NODE_10707_length_230_cov_2.205128_g10577_i0 PRJEB14664 10707 230 2.205128 5.0717944 Fimicolochytrium jonesii 1396493 Fungi Fungi 159 1.18e-34   NTclustered gi|2432064921|ref|XM_053069781.1| 1396493 g10577 i0 87.143 26.6260869565217 140 18 61 0 90 229 254 393 Fimicolochytrium jonesii tubulin, alpha, ubiquitous (EV422DRAFT_521958), mRNA blastn 6124 159 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
12774853 12774853 PRJEB14664_P_NODE_5891_length_342_cov_2.068404_g5761_i0 PRJEB14664 5891 342 2.068404 7.07394168 Rhizophydium sp. JEL138 139068 Fungi Fungi 246 1.38e-60   NTclustered gi|30088555|gb|AY138786.1| 139068 g5761 i0 79.706 13.8391812865497 340 69 99 0 1 340 922 583 Rhizophydium sp. JEL138 alpha-tubulin (atub) gene, partial cds blastn 4733 246 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium sp. JEL138
14049312 14049312 PRJEB14664_P_NODE_16212_length_173_cov_1.985507_g16082_i0 PRJEB14664 16212 173 1.985507 3.43492711 Polychytrium aggregatum 110093 Fungi Fungi 111 2.36e-20   NTclustered gi|2432156890|ref|XM_053107738.1| 110093 g16082 i0 86.275 6.66473988439306 102 14 59 0 45 146 207 106 Polychytrium aggregatum 60S ribosomal protein L2 (BJ171DRAFT_425809), partial mRNA blastn 1153 111 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19146809 19146809 PRJEB14664_P_NODE_7776_length_287_cov_1.940476_g7646_i0 PRJEB14664 7776 287 1.940476 5.56916612 Synchytrium sp. 1971732 Fungi Fungi 73.1 2.04e-8   NTclustered gi|1168020523|gb|KY800404.1| 1971732 g7646 i0 89.474 0.198606271777003 57 6 20 0 9 65 962 906 Synchytrium sp. voucher BPI 893319 large subunit ribosomal RNA gene, partial sequence blastn 57 73.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium sp.
24247085 24247085 PRJEB14664_P_NODE_5280_length_367_cov_2.271084_g5150_i0 PRJEB14664 5280 367 2.271084 8.33487828 Polychytrium aggregatum 110093 Fungi Fungi 195 5.4699999999999995e-45   NTclustered gi|2432147654|ref|XM_053111044.1| 110093 g5150 i0 84.314 41.4713896457766 204 26 56 4 27 230 1253 1450 Polychytrium aggregatum Enolase, C-terminal TIM barrel domain-containing protein (BJ171DRAFT_505639), mRNA blastn 15220 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;