RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11189066 11189066 PRJEB14664_P_NODE_10009_length_241_cov_3.184466_g9879_i0 PRJEB14664 10009 241 3.184466 7.67456306 Deinococcus 1298 Bacteria Bacteria 217 7.269999999999999e-52   NTclustered gi|485099143|ref|NR_102538.1| 432329 g9879 i0 83.817 405.45643153527 241 25 96 10 8 238 20 256 Deinococcus peraridilitoris strain KR-200 23S ribosomal RNA gene, complete sequence blastn 97715 217 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus peraridilitoris
13739219 13739219 PRJEB14664_P_NODE_5771_length_347_cov_1.708333_g5641_i0 PRJEB14664 5771 347 1.708333 5.92791551 Deinococcus 1298 Bacteria Bacteria 531 3.4599999999999992e-146   NTclustered gi|470488003|ref|NR_076846.1| 55148 g5641 i0 95.482 196.07204610951 332 15 96 0 16 347 564 895 Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence blastn 68037 532 0.99812030075188 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus proteolyticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;