RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 13 ✖

bioproject 1

  • PRJEB14664 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7673495 7673495 PRJEB14664_P_NODE_6227_length_331_cov_1.777027_g6097_i0 PRJEB14664 6227 331 1.777027 5.88195937 Zebrafish picornavirus 1 2304617 Viruses Viruses 558 1.51e-154   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g6097 i0 97.264 2.98187311178248 329 9 99 0 3 331 5190 4862 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 987 558 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
10223867 10223867 PRJEB14664_P_NODE_10049_length_240_cov_8.560976_g9919_i0 PRJEB14664 10049 240 8.560976 20.5463424 Mitovirus sp. 2587224 Viruses Viruses 119 2.1e-22   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g9919 i0 93.671 0.329166666666667 79 5 33 0 23 101 33 111 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 79 119 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
11499198 11499198 PRJEB14664_P_NODE_13730_length_194_cov_1.496855_g13600_i0 PRJEB14664 13730 194 1.496855 2.9038987 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 320 4.16e-83   NTclustered gi|2754692084|gb|PP872771.1| 3003959 g13600 i0 96.392 1 194 7 100 0 1 194 3775 3582 MAG: Picornavirales sp. isolate TC-PLV-215 MR233-17E/839 genomic sequence blastn 194 320 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
15323351 15323351 PRJEB14664_P_NODE_15593_length_178_cov_1.650350_g15463_i0 PRJEB14664 15593 178 1.65035 2.937623 Zebrafish picornavirus 1 2304617 Viruses Viruses 291 2.93e-74   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g15463 i0 96.067 3 178 7 100 0 1 178 2845 2668 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 534 291 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15323365 15323365 PRJEB14664_P_NODE_1633_length_723_cov_2.340116_g1533_i0 PRJEB14664 1633 723 2.340116 16.91903868 Zebrafish picornavirus 1 2304617 Viruses Viruses 1264 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g1533 i0 98.202 3 723 13 100 0 1 723 7206 7928 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2169 1264 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
16598069 16598069 PRJEB14664_P_NODE_3094_length_513_cov_1.755230_g2972_i0 PRJEB14664 3094 513 1.75523 9.0043299 Zebrafish picornavirus 1 2304617 Viruses Viruses 848 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g2972 i0 96.491 3 513 18 100 0 1 513 4204 4716 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1539 848 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
16598083 16598083 PRJEB14664_P_NODE_3974_length_441_cov_2.128079_g3847_i0 PRJEB14664 3974 441 2.128079 9.38482839 Chrocagosk virus 3129397 Viruses Viruses 466 1.2899999999999999e-126   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g3847 i0 92.145 71.3446712018141 331 24 75 2 89 419 329 1 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 31463 466 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
20421851 20421851 PRJEB14664_P_NODE_14117_length_191_cov_1.134615_g13987_i0 PRJEB14664 14117 191 1.134615 2.16711465 Zebrafish picornavirus 1 2304617 Viruses Viruses 318 1.4699999999999996e-82   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g13987 i0 96.842 2.98429319371728 190 6 99 0 2 191 3661 3850 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 570 318 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
20421978 20421978 PRJEB14664_P_NODE_7597_length_291_cov_2.234375_g7467_i0 PRJEB14664 7597 291 2.234375 6.50203125 Mitovirus sp. 2587224 Viruses Viruses 174 5.51e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g7467 i0 94.643 3.22680412371134 112 6 38 0 176 287 112 1 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
21697858 21697858 PRJEB14664_P_NODE_11958_length_213_cov_1.741573_g11828_i0 PRJEB14664 11958 213 1.741573 3.70955049 Zebrafish picornavirus 1 2304617 Viruses Viruses 344 2.76e-90   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g11828 i0 95.775 3 213 9 100 0 1 213 3980 4192 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 639 344 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
22973180 22973180 PRJEB14664_P_NODE_18339_length_159_cov_1.935484_g18209_i0 PRJEB14664 18339 159 1.935484 3.07741956 Zebrafish picornavirus 1 2304617 Viruses Viruses 267 4.3199999999999996e-67   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g18209 i0 96.855 2.9874213836478 159 5 100 0 1 159 2852 3010 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 475 267 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
22973233 22973233 PRJEB14664_P_NODE_5119_length_374_cov_2.784661_g4989_i0 PRJEB14664 5119 374 2.784661 10.41463214 Zebrafish picornavirus 1 2304617 Viruses Viruses 647 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g4989 i0 97.861 2.99465240641711 374 8 100 0 1 374 6943 6570 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1120 647 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24246963 24246963 PRJEB14664_P_NODE_12720_length_204_cov_1.863905_g12590_i0 PRJEB14664 12720 204 1.863905 3.8023662 Zebrafish picornavirus 1 2304617 Viruses Viruses 353 4.36e-93   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g12590 i0 98.03 2.98529411764706 203 4 99 0 1 203 5687 5485 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 609 353 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;