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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 2 ✖

bioproject 1

  • PRJEB14664 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5123570 5123570 PRJEB14664_P_NODE_14445_length_188_cov_1.490196_g14315_i0 PRJEB14664 14445 188 1.490196 2.80156848 uncultured delta proteobacterium 34034 Bacteria Bacteria 272 1.1399999999999998e-68   NTclustered gi|374854163|dbj|AP011765.1| 34034 g14315 i0 94.828 126.792553191489 174 9 93 0 9 182 13117 13290 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 23837 272 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
22973235 22973235 PRJEB14664_P_NODE_5159_length_372_cov_2.750742_g5029_i0 PRJEB14664 5159 372 2.750742 10.23276024 uncultured delta proteobacterium 34034 Bacteria Bacteria 412 1.4099999999999998e-110   NTclustered gi|374854163|dbj|AP011765.1| 34034 g5029 i0 86.792 130.129032258065 371 48 99 1 1 370 13291 13661 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 48408 412 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;