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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJEB14664" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJEB14664 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1295312 1295312 PRJEB14664_P_NODE_10602_length_232_cov_1.218274_g10472_i0 PRJEB14664 10602 232 1.218274 2.82639568 Spumochlamys perforata 675831 Tubulinea other_Eukaryota 63.9 9.58e-6   NTclustered gi|259595675|gb|FJ705339.1| 675831 g10472 i0 97.297 13.875 37 1 16 0 133 169 861 897 Spumochlamys perforata clone 2504 18S ribosomal RNA gene, partial sequence blastn 3219 63.9 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys perforata
2571050 2571050 PRJEB14664_P_NODE_15703_length_177_cov_1.690141_g15573_i0 PRJEB14664 15703 177 1.690141 2.99154957 Cavenderia fasciculata 261658 Evosea other_Eukaryota 93.5 8.81e-15   NTclustered gi|470266378|ref|XM_004361682.1| 261658 g15573 i0 83.019 2.83050847457627 106 14 59 4 15 118 623 520 Cavenderia fasciculata 40S ribosomal protein S8 (rps8), partial mRNA blastn 501 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
2571112 2571112 PRJEB14664_P_NODE_3183_length_505_cov_2.889362_g3061_i0 PRJEB14664 3183 505 2.889362 14.5912781 Platyamoeba placida 3454475 Discosea other_Eukaryota 658 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g3061 i0 90.4 99.0594059405941 500 48 99 0 3 502 581 1080 Platyamoeba placida actin mRNA, partial cds blastn 50025 658 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
5123638 5123638 PRJEB14664_P_NODE_2485_length_580_cov_2.715596_g2371_i0 PRJEB14664 2485 580 2.715596 15.7504568 Lamproderma scintillans 1115720 Evosea other_Eukaryota 414 6.34e-111   NTclustered gi|2306687667|gb|MZ234283.1| 1115720 g2371 i0 80.251 84.2103448275862 557 104 96 6 27 580 724 171 Lamproderma scintillans voucher LE265994 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 48842 414 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Lamproderma Lamproderma scintillans
5123664 5123664 PRJEB14664_P_NODE_465_length_1298_cov_4.947743_g419_i0 PRJEB14664 465 1298 4.947743 64.22170414 Soliformovum irregulare 435424 Evosea other_Eukaryota 1840 0   NTclustered gi|146448863|gb|EF513199.1| 435424 g419 i0 94.196 64.1802773497689 1206 70 93 0 1 1206 3 1208 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 83306 1840 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
6399460 6399460 PRJEB14664_P_NODE_9846_length_244_cov_3.019139_g9716_i0 PRJEB14664 9846 244 3.019139 7.36669916 Soliformovum irregulare 435424 Evosea other_Eukaryota 148 2.7299999999999997e-31   NTclustered gi|381139238|emb|HE655045.1| 435424 g9716 i0 87.692 11.4877049180328 130 13 53 3 1 129 208 335 Soliformovum irregulare partial 28S rRNA gene, strain ATCC 26826 blastn 2803 148 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
6399462 6399462 PRJEB14664_P_NODE_9926_length_243_cov_1.711538_g9796_i0 PRJEB14664 9926 243 1.711538 4.15903734 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 281 2.57e-71   NTclustered gi|167859711|gb|EU273435.1| 1346289 g9796 i0 87.603 99.7283950617284 242 30 99 0 1 242 354 595 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 24234 281 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
7673455 7673455 PRJEB14664_P_NODE_2907_length_532_cov_1.738431_g2385_i1 PRJEB14664 2907 532 1.738431 9.24845292 uncultured Soliformovum 2510342 Evosea other_Eukaryota 593 6.919999999999998e-165   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g2385 i1 95.225 37.6278195488722 377 15 71 2 157 532 425 51 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 20018 593 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
10223996 10223996 PRJEB14664_P_NODE_5069_length_377_cov_1.859649_g4939_i0 PRJEB14664 5069 377 1.859649 7.01087673 Copromyxa protea 931554 Tubulinea other_Eukaryota 281 4.21e-71   NTclustered gi|508737347|dbj|AB766053.1| 931554 g4939 i0 83.498 0.803713527851459 303 48 80 2 68 369 1389 1088 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 303 281 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
11189094 11189094 PRJEB14664_P_NODE_16849_length_169_cov_1.425373_g16719_i0 PRJEB14664 16849 169 1.425373 2.40888037 Vannella 95228 Discosea other_Eukaryota 313 5.859999999999999e-81   NTclustered gi|62865934|gb|AY929909.1| 325075 g16719 i0 100 100.781065088757 169 0 100 0 1 169 851 1019 Vannella sp. strain 4362V/II 18S small subunit ribosomal RNA gene, partial sequence blastn 17032 313 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4362V/II
11499179 11499179 PRJEB14664_P_NODE_12030_length_212_cov_1.830508_g11900_i0 PRJEB14664 12030 212 1.830508 3.88067696 Platyamoeba placida 3454475 Discosea other_Eukaryota 281 2.18e-71   NTclustered gi|33946348|gb|AY294153.1| 197527 g11900 i0 90.61 99.3066037735849 213 19 100 1 1 212 919 707 Platyamoeba placida actin mRNA, partial cds blastn 21053 281 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
11499225 11499225 PRJEB14664_P_NODE_17110_length_167_cov_1.515152_g16980_i0 PRJEB14664 17110 167 1.515152 2.53030384 Heterostelium album 2086695 Evosea other_Eukaryota 100 4.93e-17   NTclustered gi|1160572408|ref|XM_020576382.1| 670386 g16980 i0 81.452 5.32934131736527 124 21 74 2 1 123 396 518 Polysphondylium pallidum PN500 S60 ribosomal protein L10a (rpl10a), partial mRNA blastn 890 100 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
12774862 12774862 PRJEB14664_P_NODE_711_length_1066_cov_2.824442_g648_i0 PRJEB14664 711 1066 2.824442 30.10855172 Copromyxa protea 931554 Tubulinea other_Eukaryota 1123 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g648 i0 86.351 15.6810506566604 1055 114 97 21 36 1066 1389 341 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 16716 1123 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
14049352 14049352 PRJEB14664_P_NODE_20312_length_150_cov_1.391304_g20182_i0 PRJEB14664 20312 150 1.391304 2.086956 Physarum polycephalum 5791 Evosea other_Eukaryota 147 5.45e-31   NTclustered gi|161220|gb|M58521.1|SLMBETA 5791 g20182 i0 84.828 83.54 145 22 97 0 1 145 490 634 P.polycephalum beta-tubulin-1 (betA) mRNA, 5' end blastn 12531 147 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
16597960 16597960 PRJEB14664_P_NODE_11274_length_223_cov_1.175532_g11144_i0 PRJEB14664 11274 223 1.175532 2.62143636 Arcella hemisphaerica 497998 Tubulinea other_Eukaryota 219 1.8399999999999994e-52   NTclustered gi|304308781|gb|HM853722.1| 497998 g11144 i0 84.375 79.2242152466368 224 33 100 2 1 223 748 526 Arcella hemisphaerica strain blue&red clone act35 actin gene, partial cds blastn 17667 219 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Arcellidae Arcella Arcella hemisphaerica
17872881 17872881 PRJEB14664_P_NODE_5275_length_367_cov_20.689759_g5145_i0 PRJEB14664 5275 367 20.689759 75.93141553 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 204 9.09e-48   NTclustered gi|470521486|ref|XM_004353672.1| 1257118 g5145 i0 82.479 64.16621253406 234 39 63 2 99 331 99 331 Acanthamoeba castellanii str. Neff Histone H4, putative (ACA1_376700), partial mRNA blastn 23549 204 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19146728 19146728 PRJEB14664_P_NODE_19916_length_152_cov_1.367521_g19786_i0 PRJEB14664 19916 152 1.367521 2.07863192 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 270 3.15e-68   NTclustered gi|259906315|gb|GQ844618.1| 590481 g19786 i0 98.684 8.00657894736842 152 2 100 0 1 152 155 306 Uncultured Amoebozoa clone TB0-37 18S ribosomal RNA gene, partial sequence blastn 1217 270 1 Eukaryota Amoebozoa             uncultured Amoebozoa
21387884 21387884 PRJEB14664_P_NODE_4097_length_433_cov_1.804020_g3970_i0 PRJEB14664 4097 433 1.80402 7.8114066 Dictyostelium 5782 Evosea other_Eukaryota 267 1.3699999999999998e-66   NTclustered gi|2564919|gb|AF025951.1| 44689 g3970 i0 79.74 62.7413394919169 385 65 87 11 1 377 514 135 Dictyostelium discoideum heat-shock cognate protein 70 (hsc70) mRNA, complete cds blastn 27167 267 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22973206 22973206 PRJEB14664_P_NODE_2499_length_578_cov_2.976059_g2385_i0 PRJEB14664 2499 578 2.976059 17.20162102 uncultured Soliformovum 2510342 Evosea other_Eukaryota 593 7.559999999999997e-165   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g2385 i0 95.225 36.7179930795848 377 15 65 2 203 578 425 51 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 21223 593 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;