RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25644383 25644383 PRJEB14175_P_NODE_270626_length_189_cov_3.546875_g268358_i0 PRJEB14175 270626 189 3.546875 6.70359375 Rotaliella elatiana 35210 SAR_Eukaryotes SAR_Eukaryotes 156 1.2e-33   NTclustered gi|643022|emb|X78521.1| 35210 g268358 i0 86.395 16.3703703703704 147 14 76 4 17 159 3803 3947 R.elatiana complete gene of large subunit rRNA blastn 3094 156 1 Eukaryota Sar   Foraminifera   Rotaliida Rotaliidae Rotaliella Rotaliella elatiana
26317688 26317688 PRJEB14175_P_NODE_112087_length_333_cov_12.286765_g109821_i0 PRJEB14175 112087 333 12.286765 40.91492745 Pulleniatina obliquiloculata 225066 SAR_Eukaryotes SAR_Eukaryotes 303 7.85e-78   NTclustered gi|998623053|dbj|LC049332.1| 225066 g109821 i0 87.319 49.2582582582583 276 21 79 12 14 276 3945 4219 Pulleniatina obliquiloculata gene for 28S rRNA, partial sequence, isolate: 11-9-T94 blastn 16403 303 1 Eukaryota Sar   Foraminifera   Rotaliida Pulleniatinidae Pulleniatina Pulleniatina obliquiloculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;