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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25510037 25510037 PRJEB14175_P_NODE_51137_length_521_cov_8.626087_g48896_i0 PRJEB14175 51137 521 8.626087 44.94191327 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 848 0   NTclustered gi|1758284524|gb|MN544291.1| 2653195 g48896 i0 97.047 40.5278310940499 508 8 98 5 12 519 862 1362 Thecamoeba foliovenanda strain Ta68 small subunit ribosomal RNA gene, partial sequence blastn 21115 848 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
25637500 25637500 PRJEB14175_P_NODE_115010_length_328_cov_5.142322_g112744_i0 PRJEB14175 115010 328 5.142322 16.86681616 Vannella septentrionalis 197531 Discosea other_Eukaryota 442 1.5699999999999994e-119   NTclustered gi|300078499|gb|GU001161.1| 197531 g112744 i0 90.991 34.0762195121951 333 23 100 6 1 328 1167 837 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11177 442 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25641482 25641482 PRJEB14175_P_NODE_200034_length_228_cov_2.209581_g197767_i0 PRJEB14175 200034 228 2.209581 5.03784468 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 211 3.17e-50   NTclustered gi|470506207|ref|XM_004348670.1| 1257118 g197767 i0 92.517 0.644736842105263 147 11 64 0 74 220 396 250 Acanthamoeba castellanii str. Neff actin binding protein (ACA1_035360), partial mRNA blastn 147 211 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25642551 25642551 PRJEB14175_P_NODE_22538_length_774_cov_13.193548_g20625_i0 PRJEB14175 22538 774 13.193548 102.11806152 Thecamoeba similis 242545 Discosea other_Eukaryota 987 0   NTclustered gi|33946350|gb|AY294154.1| 242545 g20625 i0 90.996 93.2906976744186 733 65 95 1 43 774 1160 428 Thecamoeba similis actin mRNA, complete cds blastn 72207 987 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
25744635 25744635 PRJEB14175_P_NODE_173506_length_251_cov_1.589474_g171239_i0 PRJEB14175 173506 251 1.589474 3.98957974 Acanthamoeba 5754 Discosea other_Eukaryota 425 1.16e-114   NTclustered gi|2979652|gb|AF019052.1|AF019052 5757 g171239 i0 100 92.7011952191235 230 0 92 0 1 230 914 685 Acanthamoeba polyphaga Panola Mountain 18S ribosomal RNA gene, partial sequence blastn 23268 425 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
25773893 25773893 PRJEB14175_P_NODE_119139_length_321_cov_3.200000_g116873_i0 PRJEB14175 119139 321 3.2 10.272 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 111 4.9e-20   NTclustered gi|470515612|ref|XM_004352895.1| 1257118 g116873 i0 91.358 3.20560747663551 81 7 25 0 220 300 389 309 Acanthamoeba castellanii str. Neff ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3), putative (ACA1_070050), partial mRNA blastn 1029 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25780415 25780415 PRJEB14175_P_NODE_267971_length_192_cov_4.259542_g265703_i0 PRJEB14175 267971 192 4.259542 8.17832064 Platyamoeba sp. strain CAZ7/I 325065 Discosea other_Eukaryota 316 5.31e-82   NTclustered gi|62865947|gb|AY929922.1| 325065 g265703 i0 97.826 96.1875 184 3 96 1 1 184 554 372 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 18468 316 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
25920306 25920306 PRJEB14175_P_NODE_87852_length_386_cov_25.932308_g85587_i0 PRJEB14175 87852 386 25.932308 100.09870888 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 233 1.2299999999999998e-56   NTclustered gi|300078498|gb|GU001160.1| 5755 g85587 i0 95.862 32.9507772020725 145 4 70 2 24 166 6181 6325 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12719 233 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26015395 26015395 PRJEB14175_P_NODE_106820_length_343_cov_22.609929_g104554_i0 PRJEB14175 106820 343 22.609929 77.55205647 Viridiplantae 33090 Discosea other_Eukaryota 178 5.13e-40   NTclustered gi|470510787|ref|XM_004351525.1| 1257118 g104554 i0 92.063 37.4169096209913 126 10 37 0 195 320 591 466 Acanthamoeba castellanii str. Neff ribosomal protein S7p/S5e, putative (ACA1_149890), partial mRNA blastn 12834 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26051265 26051265 PRJEB14175_P_NODE_234021_length_207_cov_2.191781_g231753_i0 PRJEB14175 234021 207 2.191781 4.53698667 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 106 1.37e-18   NTclustered gi|145386788|gb|EF216913.1| 180228 g231753 i0 79.167 25.0966183574879 168 23 79 9 35 198 1644 1485 Paramoeba pemaquidensis strain NP251002 28S large subunit ribosomal RNA gene, partial sequence blastn 5195 106 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
26317612 26317612 PRJEB14175_P_NODE_110607_length_336_cov_7.407273_g108341_i0 PRJEB14175 110607 336 7.407273 24.88843728 Vannella septentrionalis 197531 Discosea other_Eukaryota 553 7.13e-153   NTclustered gi|300078499|gb|GU001161.1| 197531 g108341 i0 97.819 37.6875 321 6 95 1 1 320 1167 847 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12663 553 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
26325588 26325588 PRJEB14175_P_NODE_39023_length_597_cov_11.548507_g36839_i0 PRJEB14175 39023 597 11.548507 68.94458679 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 243 3.2700000000000002e-59   NTclustered gi|932090235|gb|KP054475.2| 5757 g36839 i0 78.919 56.606365159129 370 68 61 10 124 488 2185 2549 Acanthamoeba polyphaga strain Linc Ap-1 mitochondrion, complete genome blastn 33794 243 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
26326790 26326790 PRJEB14175_P_NODE_5895_length_1418_cov_30.511422_g4866_i0 PRJEB14175 5895 1418 30.511422 432.65196396 Thecamoeba quadrilineata 343530 Discosea other_Eukaryota 654 0   NTclustered gi|2386968834|ref|NC_068853.1| 343530 g4866 i0 81.193 7.43229901269394 872 113 60 33 104 953 10558 9716 Thecamoeba quadrilineata mitochondrion, complete genome blastn 10539 654 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba quadrilineata
26457012 26457012 PRJEB14175_P_NODE_174264_length_250_cov_3.158730_g171997_i0 PRJEB14175 174264 250 3.15873 7.896825 Thecamoeba similis 242545 Discosea other_Eukaryota 363 9.209999999999997e-96   NTclustered gi|33946350|gb|AY294154.1| 242545 g171997 i0 93.443 96.656 244 16 98 0 7 250 994 751 Thecamoeba similis actin mRNA, complete cds blastn 24164 363 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
26563485 26563485 PRJEB14175_P_NODE_69192_length_443_cov_13.128272_g66934_i0 PRJEB14175 69192 443 13.128272 58.15824496 Vannella 95228 Discosea other_Eukaryota 791 0   NTclustered gi|319659363|gb|GU320600.1| 943213 g66934 i0 98.871 99.647855530474 443 5 100 0 1 443 42 484 Vannella sp. COHH 72 18S ribosomal RNA gene, partial sequence blastn 44144 797 0.992471769134254 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. COHH 72

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;