RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25508767 25508767 PRJEB14175_P_NODE_29049_length_689_cov_4.990446_g26982_i0 PRJEB14175 29049 689 4.990446 34.38417294 Lacustromyces hiemalis 110070 Fungi Fungi 259 3.770000000000001e-64   NTclustered gi|1866582727|gb|MT730902.1| 110070 g26982 i0 76.529 71.8534107402032 507 99 72 18 183 680 4810 4315 Lacustromyces hiemalis isolate JEL0938 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 49507 259 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Lacustromyces Lacustromyces hiemalis
25511872 25511872 PRJEB14175_P_NODE_83841_length_397_cov_9.154762_g81577_i0 PRJEB14175 83841 397 9.154762 36.34440514 Fimicolochytrium jonesii 1396493 Fungi Fungi 364 4.3e-96   NTclustered gi|2432099577|ref|XM_053071310.1| 1396493 g81577 i0 86.446 77.72040302267 332 45 84 0 40 371 141 472 Fimicolochytrium jonesii 60S ribosomal protein L42 (EV422DRAFT_542876), mRNA blastn 30855 364 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
25607757 25607757 PRJEB14175_P_NODE_142241_length_286_cov_8.031111_g139974_i0 PRJEB14175 142241 286 8.031111 22.96897746 Spizellomycetaceae 34479 Fungi Fungi 399 8.189999999999999e-107   NTclustered gi|1866582797|gb|MT730972.1| 4816 g139974 i0 93.091 96.1433566433566 275 16 96 3 1 275 2836 2565 Spizellomyces acuminatus isolate Sacum small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27497 399 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces acuminatus
25640617 25640617 PRJEB14175_P_NODE_180474_length_244_cov_4.049180_g178207_i0 PRJEB14175 180474 244 4.04918 9.8799992 uncultured Rhizophydiales 687209 Fungi Fungi 54.7 0.006   NTclustered gi|1666220530|gb|MH643793.1| 687209 g178207 i0 96.875 4.27459016393443 32 1 13 0 148 179 5423 5454 Uncultured Rhizophydiales isolate SkChyt5 18S ribosomal RNA gene, partial sequence; putative homing endonuclease gene, complete cds; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1043 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales     uncultured Rhizophydiales
25747574 25747574 PRJEB14175_P_NODE_75434_length_422_cov_19.980609_g73175_i0 PRJEB14175 75434 422 19.980609 84.31816998 Monoblepharis 79276 Fungi Fungi 422 2.69e-113   NTclustered gi|675392006|gb|KJ668120.1| 109952 g73175 i0 85.176 100.623222748815 425 48 100 13 1 422 1455 1867 Monoblepharis hypogyna voucher Whisler Hypho3 28S ribosomal RNA gene, partial sequence blastn 42463 422 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Monoblepharidaceae Monoblepharis Monoblepharis hypogyna
25778686 25778686 PRJEB14175_P_NODE_223179_length_211_cov_3.720000_g220911_i0 PRJEB14175 223179 211 3.72 7.8492 Polychytrium aggregatum 110093 Fungi Fungi 141 3.85e-29   NTclustered gi|2432145370|ref|XM_053110823.1| 110093 g220911 i0 89.286 1.37914691943128 112 12 53 0 81 192 441 330 Polychytrium aggregatum ribosomal protein L21e-domain-containing protein (BJ171DRAFT_502997), mRNA blastn 291 141 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
25781290 25781290 PRJEB14175_P_NODE_36723_length_615_cov_25.749097_g34557_i0 PRJEB14175 36723 615 25.749097 158.35694655 Polychytrium aggregatum 110093 Fungi Fungi 257 1.2e-63   NTclustered gi|2432131875|ref|XM_053109384.1| 110093 g34557 i0 83.392 41.7170731707317 283 42 46 4 150 429 137 417 Polychytrium aggregatum 40S ribosomal protein S20 (BJ171DRAFT_488555), mRNA blastn 25656 257 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
25911537 25911537 PRJEB14175_P_NODE_14996_length_928_cov_8.928489_g13371_i0 PRJEB14175 14996 928 8.928489 82.85637792 Dendrochytridium crassum 1352835 Fungi Fungi 195 1.47e-44   NTclustered gi|82398285|gb|DQ273785.1| 1352835 g13371 i0 88.485 17.3168103448276 165 14 18 5 334 496 2009 1848 Dendrochytridium crassum isolate AFTOL-ID 41 28S ribosomal RNA gene, partial sequence blastn 16070 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Dendrochytridium Dendrochytridium crassum
25911562 25911562 PRJEB14175_P_NODE_150316_length_276_cov_6.595349_g148049_i0 PRJEB14175 150316 276 6.595349 18.20316324 Polychytrium aggregatum 110093 Fungi Fungi 102 2.48e-17   NTclustered gi|2432131875|ref|XM_053109384.1| 110093 g148049 i0 92.857 1.39492753623188 70 5 25 0 27 96 348 417 Polychytrium aggregatum 40S ribosomal protein S20 (BJ171DRAFT_488555), mRNA blastn 385 102 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
26154597 26154597 PRJEB14175_P_NODE_279629_length_169_cov_7.388889_g277361_i0 PRJEB14175 279629 169 7.388889 12.48722241 Chytridiomycetes 451435 Fungi Fungi 207 2.85e-49   NTclustered gi|386165150|gb|HQ901770.1| 1134071 g277361 i0 89.349 100.366863905325 169 12 100 2 1 169 1199 1361 Arkaya sp. JEL581 18S small subunit ribosomal RNA gene, partial sequence blastn 16962 207 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Arkaya Arkaya sp. JEL581
26182466 26182466 PRJEB14175_P_NODE_122342_length_315_cov_33.751969_g120076_i0 PRJEB14175 122342 315 33.751969 106.31870235 Operculomyces laminatus 382552 Fungi Fungi 156 2.18e-33   NTclustered gi|1866582516|gb|MT730691.1| 382552 g120076 i0 91.964 51.231746031746 112 7 57 2 1 111 4288 4398 Operculomyces laminatus isolate JEL0223 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16138 156 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Operculomyces Operculomyces laminatus
26183695 26183695 PRJEB14175_P_NODE_147326_length_280_cov_2.333333_g145059_i0 PRJEB14175 147326 280 2.333333 6.5333324 Spizellomyces sp. 'palustris' 117820 Fungi Fungi 121 6.969999999999999e-23   NTclustered gi|1693299050|ref|NC_042879.1| 117820 g145059 i0 92.857 0.3 84 5 30 1 197 280 73884 73966 Spizellomyces palustris culture CBS:455.65 strain CBS 455.65 mitochondrion, complete genome blastn 84 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
26189023 26189023 PRJEB14175_P_NODE_27614_length_705_cov_11.900621_g25577_i0 PRJEB14175 27614 705 11.900621 83.89937805 uncultured Chytridiomycota 175247 Fungi Fungi 603 1.5499999999999996e-167   NTclustered gi|261871809|gb|GU055563.1| 175247 g25577 i0 97.45 87.686524822695 353 9 94 0 328 680 1397 1045 Uncultured Chytridiomycota clone NG_N_C01 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 61819 603 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
26291923 26291923 PRJEB14175_P_NODE_88030_length_386_cov_5.880000_g85765_i0 PRJEB14175 88030 386 5.88 22.6968 Monoblepharis 79276 Fungi Fungi 303 9.21e-78   NTclustered gi|675392006|gb|KJ668120.1| 109952 g85765 i0 81.959 97.9041450777202 388 42 99 11 1 385 1867 1505 Monoblepharis hypogyna voucher Whisler Hypho3 28S ribosomal RNA gene, partial sequence blastn 37791 303 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Monoblepharidaceae Monoblepharis Monoblepharis hypogyna
26318697 26318697 PRJEB14175_P_NODE_131815_length_301_cov_3.404167_g129548_i0 PRJEB14175 131815 301 3.404167 10.24654267 Asterophlyctis sp. 2750428 Fungi Fungi 276 1.53e-69   NTclustered gi|1866582725|gb|MT730900.1| 2750428 g129548 i0 83.498 101.906976744186 303 43 100 6 1 301 2911 2614 Asterophlyctis sp. isolate JEL0934 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30674 276 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Asterophlyctis Asterophlyctis sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;