RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25509988 25509988 PRJEB14175_P_NODE_50201_length_526_cov_12.432258_g47967_i0 PRJEB14175 50201 526 12.432258 65.39367708 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 420 1.2299999999999998e-112   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g47967 i0 81.712 469.30608365019 514 85 97 8 17 526 160348 160856 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 246855 420 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
25777152 25777152 PRJEB14175_P_NODE_186307_length_239_cov_3.471910_g184040_i0 PRJEB14175 186307 239 3.47191 8.2978649 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 152 2.06e-32   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g184040 i0 80.788 77.602510460251 203 32 84 6 34 233 160638 160836 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 18547 152 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
25777635 25777635 PRJEB14175_P_NODE_197195_length_230_cov_4.343195_g194928_i0 PRJEB14175 197195 230 4.343195 9.9893485 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 217 6.88e-52   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g194928 i0 84.545 189.326086956522 220 33 96 1 7 226 161591 161809 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 43545 217 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
26056681 26056681 PRJEB14175_P_NODE_94885_length_369_cov_6.577922_g92619_i0 PRJEB14175 94885 369 6.577922 24.27253218 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 348 3.99e-91   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g92619 i0 85.07 191.634146341463 355 37 93 13 17 361 161064 161412 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 70713 348 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
26326555 26326555 PRJEB14175_P_NODE_55111_length_501_cov_9.556818_g52865_i0 PRJEB14175 55111 501 9.556818 47.87965818 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 381 5.5e-101   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g52865 i0 81.02 297.570858283433 490 83 97 9 17 501 160348 160832 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 149083 381 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;