RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB14175 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26318175 26318175 PRJEB14175_P_NODE_121879_length_316_cov_7.996078_g119613_i0 PRJEB14175 121879 316 7.996078 25.26760648 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 353 7.24e-93   NTclustered gi|2258866441|gb|CP060228.1| 2052152 g119613 i0 88.927 102.645569620253 289 28 91 4 30 316 249820 249534 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-23 chromosome blastn 32436 353 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
26325362 26325362 PRJEB14175_P_NODE_35343_length_627_cov_40.980565_g33185_i0 PRJEB14175 35343 627 40.980565 256.94814255 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 364 7.039999999999998e-96   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g33185 i0 89.789 119.751196172249 284 29 86 0 321 604 964565 964848 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 75084 364 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
26463215 26463215 PRJEB14175_P_NODE_61328_length_473_cov_13.575243_g59073_i0 PRJEB14175 61328 473 13.575243 64.21089939 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 460 6.45e-125   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g59073 i0 86.343 211.30021141649 432 47 90 8 45 471 126700 126276 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 99945 460 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
26560353 26560353 PRJEB14175_P_NODE_159480_length_265_cov_20.426471_g157213_i0 PRJEB14175 159480 265 20.426471 54.13014815 Bacteria 2 Bacteria Bacteria 305 1.68e-78   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g157213 i0 90.336 66.1283018867925 238 16 88 6 11 244 963272 963506 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 17524 307 0.993485342019544 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;