RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB14175 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26048817 26048817 PRJEB14175_P_NODE_177381_length_247_cov_3.430108_g175114_i0 PRJEB14175 177381 247 3.430108 8.47236676 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 145 3.58e-30   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g175114 i0 83.537 20.4089068825911 164 17 63 8 1 156 2870191 2870030 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 5041 145 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26055575 26055575 PRJEB14175_P_NODE_74197_length_426_cov_10.772603_g71938_i0 PRJEB14175 74197 426 10.772603 45.891288779999996 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 132 5.13e-26   NTclustered gi|2893358441|emb|OZ220733.1| 2053570 g71938 i0 74.221 70.0234741784038 353 74 80 17 56 396 4162976 4163323 MAG: Candidatus Latescibacterota bacterium isolate cc6a1995-d657-4e87-88a0-a2308bb9e8e7 genome assembly, chromosome: 1 blastn 29830 132 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;