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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 19 ✖

bioproject 1

  • PRJEB14175 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25503039 25503039 PRJEB14175_P_NODE_143953_length_284_cov_4.085202_g141686_i0 PRJEB14175 143953 284 4.085202 11.60197368 uncultured delta proteobacterium 34034 Bacteria Bacteria 196 1.14e-45   NTclustered gi|2874253999|emb|OY970324.1| 34034 g141686 i0 82.684 234.799295774648 231 31 80 9 1 227 83419 83644 MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 blastn 66683 196 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25506001 25506001 PRJEB14175_P_NODE_209873_length_221_cov_1.100000_g207606_i0 PRJEB14175 209873 221 1.1 2.431 Dissulfurimicrobium hydrothermale 1750598 Bacteria Bacteria 150 6.749999999999999e-32   NTclustered gi|2190143862|gb|CP085041.1| 1750598 g207606 i0 90.435 109.004524886878 115 10 52 1 53 167 693431 693544 Dissulfurimicrobium hydrothermale strain Sh68 chromosome, complete genome blastn 24090 150 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria     Dissulfurimicrobium Dissulfurimicrobium hydrothermale
25508109 25508109 PRJEB14175_P_NODE_261353_length_200_cov_8.971223_g259085_i0 PRJEB14175 261353 200 8.971223 17.942446 uncultured delta proteobacterium 34034 Bacteria Bacteria 241 3.46e-59   NTclustered gi|2874253674|emb|OY969108.1| 34034 g259085 i0 91.111 132.62 180 13 89 3 1 177 1542212 1542033 MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 blastn 26524 241 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25508645 25508645 PRJEB14175_P_NODE_277857_length_173_cov_11.401786_g275589_i0 PRJEB14175 277857 173 11.401786 19.72508978 uncultured delta proteobacterium 34034 Bacteria Bacteria 287 3.6600000000000005e-73   NTclustered gi|197360286|gb|EU979074.1| 34034 g275589 i0 96.532 102.982658959538 173 6 100 0 1 173 1289 1117 Uncultured delta proteobacterium clone g65 16S ribosomal RNA gene, partial sequence blastn 17816 287 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25510404 25510404 PRJEB14175_P_NODE_57329_length_491_cov_2.674419_g55079_i0 PRJEB14175 57329 491 2.674419 13.13139729 Persicimonas caeni 2292766 Bacteria Bacteria 191 9.73e-44   NTclustered gi|1695542189|gb|CP041186.1| 2292766 g55079 i0 82.432 143.403258655804 222 36 45 3 31 250 2652898 2652678 Persicimonas caeni strain YN101 chromosome blastn 70411 191 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas caeni
25511084 25511084 PRJEB14175_P_NODE_69569_length_442_cov_6.414698_g67311_i0 PRJEB14175 69569 442 6.414698 28.35296516 Deltaproteobacteria bacterium Smac51 2946587 Bacteria Bacteria 187 1.12e-42   NTclustered gi|2242725236|gb|CP026657.1| 2946587 g67311 i0 78.571 42.2239819004525 308 48 68 18 140 439 2066954 2066657 Deltaproteobacteria bacterium Smac51 chromosome, complete genome blastn 18663 187 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium Smac51
25644047 25644047 PRJEB14175_P_NODE_261610_length_200_cov_3.424460_g259342_i0 PRJEB14175 261610 200 3.42446 6.84892 uncultured delta proteobacterium 34034 Bacteria Bacteria 141 3.6e-29   NTclustered gi|2874254016|emb|OY970341.1| 34034 g259342 i0 84.459 168.755 148 18 73 5 22 166 592426 592571 MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 blastn 33751 141 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25776375 25776375 PRJEB14175_P_NODE_169275_length_255_cov_2.829897_g167008_i0 PRJEB14175 169275 255 2.829897 7.21623735 uncultured delta proteobacterium DeepAnt-1F12 357894 Bacteria Bacteria 303 5.79e-78   NTclustered gi|82617822|gb|DQ267495.1| 357894 g167008 i0 90.476 219.674509803922 231 21 90 1 4 233 3854 3624 Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence blastn 56017 303 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium DeepAnt-1F12
25777903 25777903 PRJEB14175_P_NODE_203355_length_225_cov_24.676829_g201088_i0 PRJEB14175 203355 225 24.676829 55.52286525 uncultured delta proteobacterium 34034 Bacteria Bacteria 110 1.17e-19   NTclustered gi|283463608|gb|GU230389.1| 34034 g201088 i0 88.764 27.04 89 10 40 0 79 167 539 627 Uncultured delta proteobacterium clone ARTE12_215 16S ribosomal RNA gene, partial sequence blastn 6084 110 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25778622 25778622 PRJEB14175_P_NODE_221515_length_212_cov_9.496689_g219247_i0 PRJEB14175 221515 212 9.496689 20.13298068 Microvenator marinus 2600177 Bacteria Bacteria 141 3.87e-29   NTclustered gi|1722470586|gb|CP042467.1| 2600177 g219247 i0 92.784 101.495283018868 97 7 46 0 116 212 702857 702761 Microvenator marinus strain V1718 chromosome, complete genome blastn 21517 141 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
25880914 25880914 PRJEB14175_P_NODE_204819_length_224_cov_6.000000_g202552_i0 PRJEB14175 204819 224 6 13.44 Bacteria 2 Bacteria Bacteria 348 2.27e-91   NTclustered gi|148749607|gb|EF636480.1| 34034 g202552 i0 97.537 90.5714285714286 203 5 91 0 22 224 235 437 Uncultured delta proteobacterium isolate DGGE gel band 9 16S ribosomal RNA gene, partial sequence blastn 20288 348 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
25920409 25920409 PRJEB14175_P_NODE_89564_length_382_cov_13.146417_g87298_i0 PRJEB14175 89564 382 13.146417 50.21931294 uncultured delta proteobacterium 34034 Bacteria Bacteria 573 6.289999999999999e-159   NTclustered gi|451917297|gb|KC451161.1| 34034 g87298 i0 94.865 94.303664921466 370 14 96 4 1 368 441 75 Uncultured delta proteobacterium clone RLBp1698 16S ribosomal RNA gene, partial sequence blastn 36024 573 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26185179 26185179 PRJEB14175_P_NODE_179358_length_245_cov_4.994565_g177091_i0 PRJEB14175 179358 245 4.994565 12.23668425 uncultured delta proteobacterium 34034 Bacteria Bacteria 342 1.17e-89   NTclustered gi|151505533|gb|EF650863.1| 34034 g177091 i0 92.531 108.69387755102 241 14 97 3 1 237 361 121 Uncultured delta proteobacterium clone AUVE_01H11 16S ribosomal RNA gene, partial sequence blastn 26630 342 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26187363 26187363 PRJEB14175_P_NODE_231182_length_208_cov_0.870748_g228914_i0 PRJEB14175 231182 208 0.870748 1.81115584 uncultured delta proteobacterium 34034 Bacteria Bacteria 115 2.29e-21   NTclustered gi|2874253659|emb|OY969087.1| 34034 g228914 i0 91.566 44.9663461538462 83 7 40 0 81 163 1075083 1075001 MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 blastn 9353 115 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26187788 26187788 PRJEB14175_P_NODE_241646_length_205_cov_2.597222_g239378_i0 PRJEB14175 241646 205 2.597222 5.3243051 uncultured delta proteobacterium 34034 Bacteria Bacteria 255 1.27e-63   NTclustered gi|374854163|dbj|AP011765.1| 34034 g239378 i0 92.222 46.5219512195122 180 14 88 0 26 205 14251 14430 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 9537 255 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26190282 26190282 PRJEB14175_P_NODE_47230_length_543_cov_5.163900_g45004_i0 PRJEB14175 47230 543 5.1639 28.039977 uncultured delta proteobacterium 34034 Bacteria Bacteria 152 5.12e-32   NTclustered gi|2874253674|emb|OY969108.1| 34034 g45004 i0 76.895 15.7458563535912 277 58 50 5 248 521 1541379 1541106 MAG: uncultured delta proteobacterium isolate MFD01828.bin.c.1 genome assembly, chromosome: 1 blastn 8550 152 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26288335 26288335 PRJEB14175_P_NODE_151478_length_275_cov_1.864486_g149211_i0 PRJEB14175 151478 275 1.864486 5.1273365 Thermodesulfobacteriota 200940 Bacteria Bacteria 353 6.19e-93   NTclustered gi|2874254016|emb|OY970341.1| 34034 g149211 i0 90.406 469.229090909091 271 22 98 4 7 275 594043 594311 MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 blastn 129038 353 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26424426 26424426 PRJEB14175_P_NODE_162239_length_262_cov_12.034826_g159972_i0 PRJEB14175 162239 262 12.034826 31.53124412 Bacteria 2 Bacteria Bacteria 429 9.449999999999999e-116   NTclustered gi|2795024240|gb|PQ251928.1| 34034 g159972 i0 98.765 92.7328244274809 243 0 92 1 23 262 166 408 Uncultured delta proteobacterium clone OTU18248 16S ribosomal RNA gene, partial sequence blastn 24296 429 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
26561318 26561318 PRJEB14175_P_NODE_210360_length_220_cov_3.471698_g208093_i0 PRJEB14175 210360 220 3.471698 7.6377356 Myxococcota 2818505 Bacteria Bacteria 174 3.99e-39   NTclustered gi|15027337|emb|AJ318168.1| 34034 g208093 i0 98.969 43.9363636363636 97 1 44 0 23 119 1292 1388 Uncultured delta proteobacterium 16S rRNA gene, clone BIrii41 blastn 9666 174 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;