RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB14175" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJEB14175 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25502304 25502304 PRJEB14175_P_NODE_129041_length_305_cov_4.225410_g126774_i0 PRJEB14175 129041 305 4.22541 12.8875005 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 381 3.1899999999999997e-101   NTclustered gi|2518596677|emb|OX639990.1| 312019 g126774 i0 91.135 297.875409836066 282 24 92 1 24 305 2629106 2628826 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 90852 381 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
26182203 26182203 PRJEB14175_P_NODE_116982_length_325_cov_1.454545_g114716_i0 PRJEB14175 116982 325 1.454545 4.72727125 Candidatus Nitrohelix vancouverensis 2705534 Bacteria Bacteria 69.4 3.03e-7   NTclustered gi|1938442527|gb|CP048620.1| 2705534 g114716 i0 85.075 0.92 67 10 21 0 238 304 494599 494665 MAG: Candidatus Nitrohelix vancouverensis isolate VA-1 chromosome blastn 299 69.4 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Candidatus Nitrohelix Candidatus Nitrohelix vancouverensis
26186255 26186255 PRJEB14175_P_NODE_203414_length_225_cov_11.432927_g201147_i0 PRJEB14175 203414 225 11.432927 25.72408575 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 147 8.919999999999999e-31   NTclustered gi|2518596677|emb|OX639990.1| 312019 g201147 i0 82.635 51.0933333333333 167 27 74 2 60 225 2630131 2629966 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 11496 147 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;