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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB1404" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB1404 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21108 21108 PRJEB1404_P_NODE_141_length_558_cov_331.079696_g55_i1 PRJEB1404 141 558 331.079696 1847.42470368 Phallusia mammillata 59560 Chordata Chordata 56.5 0.004   NTclustered gi|1834496018|emb|LR789587.1| 59560 g55 i1 92.5 0.492831541218638 40 1 7 2 3 42 4022 3985 Phallusia mammillata mRNA for RAS guanyl-releasing protein 1 (Rasgrp1 gene) blastn 275 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
21111 21111 PRJEB1404_S_NODE_1821_length_232_cov_202.649746_g1801_i0 PRJEB1404 1821 232 202.649746 470.14741072 Heterocephalus glaber 10181 Chordata Chordata 67.6 7.41e-7   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g1801 i0 100 16.0560344827586 36 0 16 0 1 36 68 33 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 3725 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
985721 985721 PRJEB1404_S_NODE_981_length_281_cov_29.256098_g961_i0 PRJEB1404 981 281 29.256098 82.20963538 root 1 Root_unresolved Root_unresolved 62.1 4.3e-5   NTclustered gi|1196716695|ref|XR_002394036.1| 10181 g961 i0 95 13.3665480427046 40 1 14 1 243 281 5 44 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X44, ncRNA blastn 3756 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
3847304 3847304 PRJEB1404_P_NODE_3864_length_179_cov_3.216216_g3838_i0 PRJEB1404 3864 179 3.216216 5.75702664 Equus caballus 9796 Chordata Chordata 58.4 3.26e-4   NTclustered gi|242115493|emb|FN420220.1| 9796 g3838 i0 94.595 0.519553072625698 37 2 21 0 139 175 107 143 Equus caballus microsatellite DNA, locus ABGe12540 blastn 93 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus caballus
4813563 4813563 PRJEB1404_S_NODE_344_length_375_cov_162.794118_g324_i0 PRJEB1404 344 375 162.794118 610.4779425 root 1 Root_unresolved Root_unresolved 63.9 1.65e-5   NTclustered gi|1196716669|ref|XR_002394010.1| 10181 g324 i0 100 9.87733333333333 34 0 9 0 4 37 51 18 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X18, ncRNA blastn 3704 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
7363399 7363399 PRJEB1404_S_NODE_1846_length_231_cov_89.408163_g1826_i0 PRJEB1404 1846 231 89.408163 206.53285653 root 1 Root_unresolved Root_unresolved 62.1 3.43e-5   NTclustered gi|1196716660|ref|XR_002394001.1| 10181 g1826 i0 100 15.1082251082251 33 0 14 0 1 33 43 11 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X9, ncRNA blastn 3490 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
7673304 7673304 PRJEB1404_S_NODE_547_length_333_cov_133.060403_g527_i0 PRJEB1404 547 333 133.060403 443.09114199 Heterocephalus glaber 10181 Chordata Chordata 67.6 1.12e-6   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g527 i0 100 11.1861861861862 36 0 11 0 298 333 33 68 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 3725 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
8638799 8638799 PRJEB1404_S_NODE_2347_length_209_cov_1280.862069_g2327_i0 PRJEB1404 2347 209 1280.862069 2677.00172421 root 1 Root_unresolved Root_unresolved 62.1 3.04e-5   NTclustered gi|1196716691|ref|XR_002394032.1| 10181 g2327 i0 100 17.0909090909091 33 0 16 0 1 33 48 16 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X40, ncRNA blastn 3572 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
8638800 8638800 PRJEB1404_S_NODE_2427_length_206_cov_267.695906_g2407_i0 PRJEB1404 2427 206 267.695906 551.45356636 root 1 Root_unresolved Root_unresolved 69.4 1.79e-7   NTclustered gi|1196716675|ref|XR_002394016.1| 10181 g2407 i0 100 18.7572815533981 37 0 18 0 1 37 44 8 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X24, ncRNA blastn 3864 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
8948075 8948075 PRJEB1404_S_NODE_2948_length_187_cov_411.546053_g2928_i0 PRJEB1404 2948 187 411.546053 769.59111911 Heterocephalus glaber 10181 Chordata Chordata 65.8 2.06e-6   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g2928 i0 100 20.1069518716578 35 0 19 0 1 35 68 34 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 3760 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
9913886 9913886 PRJEB1404_S_NODE_508_length_341_cov_13.245098_g488_i0 PRJEB1404 508 341 13.245098 45.16578418 root 1 Root_unresolved Root_unresolved 63.9 1.49e-5   NTclustered gi|2022611854|dbj|LC580283.1| 28708 g488 i0 97.297 10.8533724340176 37 1 11 0 1 37 212 176 Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23 blastn 3701 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Alcidae Synthliboramphus Synthliboramphus antiquus
11189052 11189052 PRJEB1404_S_NODE_2649_length_197_cov_76.154321_g2629_i0 PRJEB1404 2649 197 76.154321 150.02401237 root 1 Root_unresolved Root_unresolved 63.9 7.88e-6   NTclustered gi|2022611854|dbj|LC580283.1| 28708 g2629 i0 97.297 18.5837563451777 37 1 19 0 4 40 212 176 Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23 blastn 3661 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Alcidae Synthliboramphus Synthliboramphus antiquus
11499127 11499127 PRJEB1404_S_NODE_310_length_385_cov_1502.577143_g290_i0 PRJEB1404 310 385 1502.577143 5784.92200055 Leopardus geoffroyi 46844 Chordata Chordata 60.2 2.2e-4   NTclustered gi|2166791660|ref|XR_006704252.1| 46844 g290 i0 97.143 0.174025974025974 35 1 9 0 61 95 125 91 PREDICTED: Leopardus geoffroyi uncharacterized LOC123582161 (LOC123582161), ncRNA blastn 67 60.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Leopardus Leopardus geoffroyi
12464851 12464851 PRJEB1404_S_NODE_1190_length_265_cov_1013.786957_g1170_i0 PRJEB1404 1190 265 1013.786957 2686.53543605 root 1 Root_unresolved Root_unresolved 62.1 4.02e-5   NTclustered gi|1196716691|ref|XR_002394032.1| 10181 g1170 i0 100 13.4792452830189 33 0 12 0 233 265 16 48 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X40, ncRNA blastn 3572 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
14049221 14049221 PRJEB1404_S_NODE_1412_length_252_cov_2427.308756_g1392_i0 PRJEB1404 1412 252 2427.308756 6116.81806512 Leopardus geoffroyi 46844 Chordata Chordata 58.4 4.91e-4   NTclustered gi|2166791660|ref|XR_006704252.1| 46844 g1392 i0 97.059 0.357142857142857 34 1 13 0 61 94 125 92 PREDICTED: Leopardus geoffroyi uncharacterized LOC123582161 (LOC123582161), ncRNA blastn 90 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Leopardus Leopardus geoffroyi
14049228 14049228 PRJEB1404_S_NODE_292_length_390_cov_397.225352_g272_i0 PRJEB1404 292 390 397.225352 1549.1788728 Leopardus geoffroyi 46844 Chordata Chordata 65.8 4.79e-6   NTclustered gi|2166791660|ref|XR_006704252.1| 46844 g272 i0 100 9.24102564102564 35 0 9 0 1 35 122 88 PREDICTED: Leopardus geoffroyi uncharacterized LOC123582161 (LOC123582161), ncRNA blastn 3604 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Leopardus Leopardus geoffroyi
15323266 15323266 PRJEB1404_S_NODE_1453_length_250_cov_34.265116_g1433_i0 PRJEB1404 1453 250 34.265116 85.66279 Leopardus geoffroyi 46844 Chordata Chordata 65.8 2.91e-6   NTclustered gi|2166791660|ref|XR_006704252.1| 46844 g1433 i0 100 14.444 35 0 14 0 1 35 122 88 PREDICTED: Leopardus geoffroyi uncharacterized LOC123582161 (LOC123582161), ncRNA blastn 3611 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Leopardus Leopardus geoffroyi
15323272 15323272 PRJEB1404_S_NODE_593_length_327_cov_159.106164_g573_i0 PRJEB1404 593 327 159.106164 520.27715628 Heterocephalus glaber 10181 Chordata Chordata 65.8 3.95e-6   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g573 i0 100 11.4525993883792 35 0 11 0 1 35 68 34 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 3745 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17563563 17563563 PRJEB1404_S_NODE_1414_length_252_cov_226.216590_g1394_i0 PRJEB1404 1414 252 226.21659 570.0658068 root 1 Root_unresolved Root_unresolved 62.1 3.8e-5   NTclustered gi|1196716691|ref|XR_002394032.1| 10181 g1394 i0 100 13.9920634920635 33 0 13 0 1 33 48 16 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X40, ncRNA blastn 3526 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17563567 17563567 PRJEB1404_S_NODE_2914_length_188_cov_810.300654_g2894_i0 PRJEB1404 2914 188 810.300654 1523.36522952 root 1 Root_unresolved Root_unresolved 62.1 2.68e-5   NTclustered gi|1196716675|ref|XR_002394016.1| 10181 g2894 i0 100 19.25 33 0 18 0 156 188 8 40 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X24, ncRNA blastn 3619 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
20112288 20112288 PRJEB1404_S_NODE_2216_length_214_cov_156.837989_g2196_i0 PRJEB1404 2216 214 156.837989 335.63329646 root 1 Root_unresolved Root_unresolved 63.9 8.71e-6   NTclustered gi|1196716660|ref|XR_002394001.1| 10181 g2196 i0 93.023 16.0514018691589 43 3 20 0 1 43 43 1 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X9, ncRNA blastn 3435 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
22662648 22662648 PRJEB1404_S_NODE_1638_length_240_cov_208.756098_g1618_i0 PRJEB1404 1638 240 208.756098 501.0146352 root 1 Root_unresolved Root_unresolved 62.1 3.59e-5   NTclustered gi|1196716675|ref|XR_002394016.1| 10181 g1618 i0 100 15.2666666666667 33 0 14 0 1 33 40 8 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X24, ncRNA blastn 3664 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
22973070 22973070 PRJEB1404_S_NODE_1479_length_249_cov_62.257009_g1459_i0 PRJEB1404 1479 249 62.257009 155.01995241 Polypterus senegalus 55291 Chordata Chordata 272 1.5899999999999998e-68   NTclustered gi|1993937637|ref|XM_039741126.1| 55291 g1459 i0 91.089 25.5220883534137 202 17 81 1 46 246 1183 1384 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120518358), transcript variant X2, mRNA blastn 6355 272 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
22973083 22973083 PRJEB1404_S_NODE_879_length_290_cov_45.568627_g859_i0 PRJEB1404 879 290 45.568627 132.1490183 Heterocephalus glaber 10181 Chordata Chordata 63.9 1.24e-5   NTclustered gi|1196716680|ref|XR_002394021.1| 10181 g859 i0 100 12.6206896551724 34 0 12 0 257 290 11 44 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X29, ncRNA blastn 3660 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
23938065 23938065 PRJEB1404_P_NODE_2999_length_205_cov_658.425287_g2973_i0 PRJEB1404 2999 205 658.425287 1349.77183835 root 1 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|1834495258|emb|LR789206.1| 59560 g2973 i0 100 14.3756097560976 30 0 15 0 3 32 489 460 Phallusia mammillata mRNA for peptidyl-prolyl cis-trans isomerase-like 3 (Ppil3-002 gene) blastn 2947 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
23938066 23938066 PRJEB1404_S_NODE_1279_length_259_cov_63.468750_g1259_i0 PRJEB1404 1279 259 63.46875 164.3840625 root 1 Root_unresolved Root_unresolved 63.9 1.09e-5   NTclustered gi|1196716660|ref|XR_002394001.1| 10181 g1259 i0 100 13.5135135135135 34 0 13 0 226 259 10 43 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X9, ncRNA blastn 3500 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
23938071 23938071 PRJEB1404_S_NODE_2819_length_191_cov_328.416667_g2799_i0 PRJEB1404 2819 191 328.416667 627.27583397 root 1 Root_unresolved Root_unresolved 65.8 2.11e-6   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g2799 i0 100 19.5183246073298 35 0 18 0 1 35 68 34 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 3728 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
24246910 24246910 PRJEB1404_P_NODE_2520_length_223_cov_2.843750_g2494_i0 PRJEB1404 2520 223 2.84375 6.3415625 Apteryx mantelli 2696672 Chordata Chordata 56.5 0.002   NTclustered gi|840504760|emb|LK066792.1| 202946 g2494 i0 90.698 0.322869955156951 43 2 19 2 10 52 15794635 15794675 Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold38 blastn 72 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Apterygiformes Apterygidae Apteryx Apteryx mantelli
24246914 24246914 PRJEB1404_S_NODE_2920_length_188_cov_201.908497_g2900_i0 PRJEB1404 2920 188 201.908497 379.58797436 Mus musculus 10090 Chordata Chordata 76.8 9.56e-10   NTclustered gi|6561392|gb|AF162708.1|AF162708 57486 g2900 i0 97.778 19.4308510638298 45 0 24 1 135 179 27 70 Mus musculus molossinus endogenous proviral sequence Mo1 blastn 3653 76.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
25211779 25211779 PRJEB1404_P_NODE_140_length_558_cov_2342.428843_g5_i3 PRJEB1404 140 558 2342.428843 13070.75294394 root 1 Root_unresolved Root_unresolved 54.7 0.015   NTclustered gi|1196716691|ref|XR_002394032.1| 10181 g5 i3 100 2.65591397849462 29 0 5 0 1 29 44 16 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X40, ncRNA blastn 1482 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;