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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJEB1404" and tax_kingdom = "Fungi"

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tax_superkingdom 1

tax_kingdom 1

  • Fungi · 16 ✖

tax_clade 1

bioproject 1

  • PRJEB1404 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21116 21116 PRJEB1404_S_NODE_501_length_342_cov_16.605863_g481_i0 PRJEB1404 501 342 16.605863 56.79205146 uncultured fungus 175245 Fungi Fungi 566 9.339999999999999e-157   NTclustered gi|375156220|gb|JQ311569.1| 175245 g481 i0 96.491 101.014619883041 342 12 100 0 1 342 17 358 Uncultured soil fungus clone OTU97-769 28S ribosomal RNA gene, partial sequence blastn 34547 566 1 Eukaryota Opisthokonta Fungi           uncultured fungus
2261002 2261002 PRJEB1404_S_NODE_4702_length_151_cov_1.724138_g4682_i0 PRJEB1404 4702 151 1.724138 2.60344838 Pucciniales 5258 Fungi Fungi 52.8 0.012   NTclustered gi|1714236393|ref|NC_044121.1| 181123 g4682 i0 100 0.370860927152318 28 0 19 0 124 151 43867 43840 Austropuccinia psidii isolate MF-1 mitochondrion, complete genome blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii
3536320 3536320 PRJEB1404_S_NODE_2463_length_205_cov_3.976471_g2443_i0 PRJEB1404 2463 205 3.976471 8.15176555 Ascomycota 4890 Fungi Fungi 379 7.229999999999999e-101   NTclustered gi|767813157|gb|KP114602.1| 29917 g2443 i0 100 100 205 0 100 0 1 205 111 315 Cladosporium cladosporioides strain PF3 large subunit ribosomal RNA gene, partial sequence blastn 20500 379 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
6399235 6399235 PRJEB1404_S_NODE_1506_length_248_cov_1.835681_g1486_i0 PRJEB1404 1506 248 1.835681 4.55248888 uncultured fungus 175245 Fungi Fungi 126 1.2999999999999998e-24   NTclustered gi|2159203900|emb|OU942302.1| 175245 g1486 i0 93.976 2.52822580645161 83 5 33 0 1 83 832 750 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus03597 blastn 627 126 1 Eukaryota Opisthokonta Fungi           uncultured fungus
7673303 7673303 PRJEB1404_S_NODE_487_length_345_cov_6139.296774_g467_i0 PRJEB1404 487 345 6139.296774 21180.5738703 uncultured fungus 175245 Fungi Fungi 315 3.77e-81   NTclustered gi|2159204291|emb|OU942693.1| 175245 g467 i0 91.379 56.7942028985507 232 17 67 3 115 345 864 635 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus03987 blastn 19594 315 1 Eukaryota Opisthokonta Fungi           uncultured fungus
10223849 10223849 PRJEB1404_S_NODE_3029_length_185_cov_2.973333_g3009_i0 PRJEB1404 3029 185 2.973333 5.50066605 Allomyces macrogynus 28583 Fungi Fungi 307 3.05e-79   NTclustered gi|11467573|ref|NC_001715.1| 28583 g3009 i0 98.295 2.6 176 2 95 1 11 185 1748 1573 Allomyces macrogynus mitochondrion, complete genome blastn 481 307 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
11499120 11499120 PRJEB1404_P_NODE_1650_length_268_cov_1.299578_g1624_i0 PRJEB1404 1650 268 1.299578 3.48286904 Hannaella oryzae 4979 Fungi Fungi 99 3.11e-16   NTclustered gi|388597977|gb|JQ754107.1| 4979 g1624 i0 89.61 49.0037313432836 77 8 29 0 3 79 1 77 Hannaella oryzae strain CMT22 large subunit ribosomal RNA gene, partial sequence blastn 13133 99 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Hannaella Hannaella oryzae
11499122 11499122 PRJEB1404_P_NODE_3170_length_200_cov_17.349112_g3144_i0 PRJEB1404 3170 200 17.349112 34.698224 uncultured fungus 175245 Fungi Fungi 267 5.699999999999999e-67   NTclustered gi|2159202804|emb|OU941232.1| 175245 g3144 i0 91.795 83.785 195 11 97 4 8 200 903 712 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02526 blastn 16757 267 1 Eukaryota Opisthokonta Fungi           uncultured fungus
15013558 15013558 PRJEB1404_P_NODE_2752_length_214_cov_3.830601_g2726_i0 PRJEB1404 2752 214 3.830601 8.19748614 Eukaryota 2759 Fungi Fungi 361 2.7599999999999993e-95   NTclustered gi|583831563|gb|KF565126.1| 175245 g2726 i0 97.183 99.0794392523364 213 6 99 0 1 213 110 322 Uncultured soil fungus clone NCD_LSU_otu156 28S ribosomal RNA gene, partial sequence blastn 21203 361 1 Eukaryota Opisthokonta Fungi           uncultured fungus
15013559 15013559 PRJEB1404_P_NODE_312_length_448_cov_5.460432_g293_i0 PRJEB1404 312 448 5.460432 24.46273536 Dothideales 5014 Fungi Fungi 689 0   NTclustered gi|28200380|gb|AY185811.1| 5580 g293 i0 93.778 89.109375 450 25 100 3 1 448 944 496 Aureobasidium pullulans isolate 044.4 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 39921 689 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium pullulans
17563561 17563561 PRJEB1404_S_NODE_1194_length_265_cov_15.921739_g1174_i0 PRJEB1404 1194 265 15.921739 42.19260835 Eukaryota 2759 Fungi Fungi 488 1.5599999999999996e-133   NTclustered gi|514829572|gb|KC771883.1| 4929 g1174 i0 100 82.9396226415094 264 0 99 0 1 264 299 36 Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence blastn 21979 488 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
20112291 20112291 PRJEB1404_S_NODE_3656_length_169_cov_3.761194_g3636_i0 PRJEB1404 3656 169 3.761194 6.35641786 Eukaryota 2759 Fungi Fungi 159 8.08e-35   NTclustered gi|583832639|gb|KF566202.1| 175245 g3636 i0 100 50.9289940828402 86 0 51 0 84 169 419 334 Uncultured soil fungus clone NCD_LSU_otu1232 28S ribosomal RNA gene, partial sequence blastn 8607 159 1 Eukaryota Opisthokonta Fungi           uncultured fungus
20421771 20421771 PRJEB1404_S_NODE_2017_length_224_cov_5.613757_g1997_i0 PRJEB1404 2017 224 5.613757 12.57481568 Hanseniaspora uvarum 29833 Fungi Fungi 75 4.25e-9   NTclustered gi|974144812|gb|KT922772.1| 29833 g1997 i0 86.567 0.299107142857143 67 9 30 0 158 224 262 328 Hanseniaspora uvarum strain NS-O-49 26S ribosomal RNA gene, partial sequence blastn 67 75 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycodales Saccharomycodaceae Hanseniaspora Hanseniaspora uvarum
21697809 21697809 PRJEB1404_P_NODE_338_length_438_cov_5.687961_g318_i0 PRJEB1404 338 438 5.687961 24.91326918 uncultured fungus 175245 Fungi Fungi 553 9.519999999999996e-153   NTclustered gi|583833451|gb|KF567014.1| 175245 g318 i0 92.308 62.5045662100457 390 28 89 2 25 413 389 1 Uncultured soil fungus clone NCD_LSU_otu2044 28S ribosomal RNA gene, partial sequence blastn 27377 553 1 Eukaryota Opisthokonta Fungi           uncultured fungus
23938074 23938074 PRJEB1404_S_NODE_919_length_286_cov_4.494024_g899_i0 PRJEB1404 919 286 4.494024 12.85290864 Eukaryota 2759 Fungi Fungi 507 4.69e-139   NTclustered gi|401670345|gb|JX408364.1| 341458 g899 i0 98.601 105 286 4 100 0 1 286 21 306 Uncultured Saccharomyces clone MEC_1919 26S ribosomal RNA gene, partial sequence blastn 30030 507 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae   uncultured Saccharomyces
24246911 24246911 PRJEB1404_P_NODE_4040_length_174_cov_1.860140_g4014_i0 PRJEB1404 4040 174 1.86014 3.2366436 uncultured fungus 175245 Fungi Fungi 244 2.25e-60   NTclustered gi|2159204433|emb|OU942835.1| 175245 g4014 i0 93.865 36.9080459770115 163 9 94 1 9 171 1682 1843 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus04129 blastn 6422 244 1 Eukaryota Opisthokonta Fungi           uncultured fungus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;