contig_metadata
38 rows where analysis = "blastn", bioproject = "PRJEB12982" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20863 | 20863 | PRJEB12982_P_NODE_11921_length_204_cov_0.890323_g11758_i0 | PRJEB12982 | 11921 | 204 | 0.890323 | 1.81625892 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 305 | 1.24e-78 | NTclustered | gi|1798179464|gb|MN694982.1| | 11676 | g11758 | i0 | 93.627 | 94.8725490196078 | 204 | 13 | 100 | 0 | 1 | 204 | 1114 | 1317 | HIV-1 isolate C115329 from Uganda gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; vpu protein (vpu) gene, complete cds; and envelope glycoprotein (env) gene, partial cds | blastn | 19354 | 305 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 21080 | 21080 | PRJEB12982_P_NODE_7681_length_261_cov_1.141509_g7518_i0 | PRJEB12982 | 7681 | 261 | 1.141509 | 2.97933849 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 372 | 1.61e-98 | NTclustered | gi|920764021|gb|KT283806.1| | 11676 | g7518 | i0 | 92.366 | 100.463601532567 | 262 | 18 | 100 | 2 | 1 | 261 | 989 | 1249 | HIV-1 isolate P1031_8.07_7A from USA envelope glycoprotein (env) gene, complete cds | blastn | 26221 | 372 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 985709 | 985709 | PRJEB12982_P_NODE_641_length_1001_cov_19.754202_g546_i0 | PRJEB12982 | 641 | 1001 | 19.754202 | 197.73956202 | Alphainfluenzavirus | 197911 | Viruses | Viruses | 1836 | 0 | NTclustered | gi|2164748429|gb|OL831185.1| | 11320 | g546 | i0 | 99.8 | 99.2997002997003 | 1000 | 2 | 99 | 0 | 2 | 1001 | 5 | 1004 | Influenza A virus (A/India/H1N1-P2/2020(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds | blastn | 99399 | 1836 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 1295132 | 1295132 | PRJEB12982_P_NODE_16802_length_167_cov_0.974576_g16639_i0 | PRJEB12982 | 16802 | 167 | 0.974576 | 1.62754192 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 272 | 9.88e-69 | NTclustered | gi|254929527|gb|GQ333588.1| | 11676 | g16639 | i0 | 96.364 | 98.7964071856287 | 165 | 6 | 99 | 0 | 1 | 165 | 264 | 100 | HIV-1 isolate B08167A1 from Uganda envelope glycoprotein (env) gene, partial cds | blastn | 16499 | 272 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 1295220 | 1295220 | PRJEB12982_P_NODE_3582_length_405_cov_1.522472_g3419_i0 | PRJEB12982 | 3582 | 405 | 1.522472 | 6.1660116 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 625 | 1.8299999999999995e-174 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g3419 | i0 | 94.554 | 2.99259259259259 | 404 | 22 | 99 | 0 | 1 | 404 | 5149 | 5552 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 1212 | 625 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 1295276 | 1295276 | PRJEB12982_P_NODE_9362_length_232_cov_1.114754_g9199_i0 | PRJEB12982 | 9362 | 232 | 1.114754 | 2.58622928 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 396 | 8.319999999999995e-106 | NTclustered | gi|2057218147|gb|MW124063.1| | 11676 | g9199 | i0 | 97.414 | 99.9008620689655 | 232 | 6 | 100 | 0 | 1 | 232 | 687 | 918 | HIV-1 clone SN 015 from Senegal gag protein (gag) gene, complete cds; and nonfunctional pol protein (pol) gene, partial sequence | blastn | 23177 | 396 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 2570815 | 2570815 | PRJEB12982_P_NODE_17523_length_166_cov_0.871795_g17360_i0 | PRJEB12982 | 17523 | 166 | 0.871795 | 1.4471797 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 257 | 2.7400000000000003e-64 | NTclustered | gi|297341040|gb|HM204630.1| | 11676 | g17360 | i0 | 94.578 | 99.644578313253 | 166 | 9 | 100 | 0 | 1 | 166 | 1232 | 1397 | HIV-1 isolate CH080060.e.p1 from United Kingdom envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds | blastn | 16541 | 257 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 2570833 | 2570833 | PRJEB12982_P_NODE_18423_length_165_cov_0.879310_g18260_i0 | PRJEB12982 | 18423 | 165 | 0.87931 | 1.4508615 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 222 | 9.939999999999999e-54 | NTclustered | gi|1829046909|gb|MT191137.1| | 11676 | g18260 | i0 | 90.909 | 100 | 165 | 15 | 100 | 0 | 1 | 165 | 5529 | 5693 | HIV-1 isolate B207_MOGPl10_L10 from USA, complete genome | blastn | 16500 | 222 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 2570853 | 2570853 | PRJEB12982_P_NODE_19183_length_164_cov_0.886957_g19020_i0 | PRJEB12982 | 19183 | 164 | 0.886957 | 1.45460948 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 257 | 2.7e-64 | NTclustered | gi|16118339|gb|AY037277.1| | 11676 | g19020 | i0 | 95.092 | 98.6463414634146 | 163 | 8 | 99 | 0 | 2 | 164 | 4641 | 4479 | HIV-1 isolate ARMA037 from Argentina gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds | blastn | 16178 | 257 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 2570891 | 2570891 | PRJEB12982_P_NODE_21163_length_161_cov_0.910714_g21000_i0 | PRJEB12982 | 21163 | 161 | 0.910714 | 1.46624954 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 265 | 1.5799999999999998e-66 | NTclustered | gi|1811632287|gb|MN791901.1| | 11676 | g21000 | i0 | 96.273 | 98.8944099378882 | 161 | 6 | 100 | 0 | 1 | 161 | 3443 | 3283 | HIV-1 isolate 30124v14_10 from Tanzania, partial genome | blastn | 15922 | 265 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 5123264 | 5123264 | PRJEB12982_P_NODE_13185_length_193_cov_1.055556_g13022_i0 | PRJEB12982 | 13185 | 193 | 1.055556 | 2.03722308 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 318 | 1.4899999999999995e-82 | NTclustered | gi|1990739381|tpg|BK011179.1| | 2304617 | g13022 | i0 | 96.373 | 3 | 193 | 7 | 100 | 0 | 1 | 193 | 2662 | 2470 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | blastn | 579 | 318 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 5123300 | 5123300 | PRJEB12982_P_NODE_15485_length_175_cov_2.428571_g15322_i0 | PRJEB12982 | 15485 | 175 | 2.428571 | 4.24999925 | Mitovirus sp. | 2587224 | Viruses | Viruses | 171 | 3.9e-38 | NTclustered | gi|1698234317|gb|MN033515.1| | 2587224 | g15322 | i0 | 94.545 | 5.35428571428571 | 110 | 6 | 63 | 0 | 66 | 175 | 112 | 3 | MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence | blastn | 937 | 171 | 1 | Viruses | Orthornavirae | Lenarviricota | Howeltoviricetes | Cryppavirales | Mitoviridae | Mitovirus | Mitovirus sp. | ||
| 6088820 | 6088820 | PRJEB12982_P_NODE_825_length_871_cov_60.521898_g712_i0 | PRJEB12982 | 825 | 871 | 60.521898 | 527.14573158 | Alphainfluenzavirus | 197911 | Viruses | Viruses | 1605 | 0 | NTclustered | gi|324878|gb|M12597.1|FLANSW | 382835 | g712 | i0 | 100 | 98.7336394948335 | 869 | 0 | 99 | 0 | 1 | 869 | 869 | 1 | Influenza A virus (A/WSN/1933(H1N1)) nonstructural protein 1 gene, complete cds | blastn | 85997 | 1605 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 6399221 | 6399221 | PRJEB12982_P_NODE_9266_length_233_cov_1.951087_g9103_i0 | PRJEB12982 | 9266 | 233 | 1.951087 | 4.54603271 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 381 | 2.3399999999999995e-101 | NTclustered | gi|1812398529|gb|MN524064.1| | 2304617 | g9103 | i0 | 96.137 | 3 | 233 | 9 | 100 | 0 | 1 | 233 | 6005 | 6237 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | blastn | 699 | 381 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 7673148 | 7673148 | PRJEB12982_P_NODE_17687_length_166_cov_0.871795_g17524_i0 | PRJEB12982 | 17687 | 166 | 0.871795 | 1.4471797 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 289 | 9.729999999999999e-74 | NTclustered | gi|33088439|gb|AY248386.1| | 11676 | g17524 | i0 | 98.182 | 97.2710843373494 | 165 | 3 | 99 | 0 | 1 | 165 | 429 | 265 | HIV-1 isolate 01SPLP5 gag protein gene, partial cds | blastn | 16147 | 289 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 8947920 | 8947920 | PRJEB12982_P_NODE_17808_length_166_cov_0.871795_g17645_i0 | PRJEB12982 | 17808 | 166 | 0.871795 | 1.4471797 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 268 | 1.27e-67 | NTclustered | gi|86560173|gb|DQ354115.1| | 11676 | g17645 | i0 | 95.783 | 99.7710843373494 | 166 | 7 | 100 | 0 | 1 | 166 | 5512 | 5347 | HIV-1 isolate M005 subtype CRF01_AE/B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds | blastn | 16562 | 268 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 9913859 | 9913859 | PRJEB12982_P_NODE_228_length_1548_cov_61.446298_g189_i0 | PRJEB12982 | 228 | 1548 | 61.446298 | 951.18869304 | root | 1 | Root_unresolved | Root_unresolved | 2846 | 0 | NTclustered | gi|2164728774|gb|OL831136.1| | 11320 | g189 | i0 | 99.935 | 99.1395348837209 | 1544 | 1 | 99 | 0 | 5 | 1548 | 1 | 1544 | Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds | blastn | 153468 | 2848 | 0.999297752808989 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 10223689 | 10223689 | PRJEB12982_P_NODE_17449_length_166_cov_1.102564_g17286_i0 | PRJEB12982 | 17449 | 166 | 1.102564 | 1.83025624 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 263 | 5.9e-66 | NTclustered | gi|24753971|gb|AF538304.1| | 11676 | g17286 | i0 | 95.181 | 92.6204819277108 | 166 | 8 | 100 | 0 | 1 | 166 | 6955 | 6790 | HIV-1 clone C24 from Australia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds | blastn | 15375 | 263 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 11498852 | 11498852 | PRJEB12982_P_NODE_10490_length_218_cov_0.928994_g10327_i0 | PRJEB12982 | 10490 | 218 | 0.928994 | 2.02520692 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 381 | 2.1599999999999994e-101 | NTclustered | gi|222144965|gb|FJ473615.1| | 11676 | g10327 | i0 | 98.165 | 100 | 218 | 4 | 100 | 0 | 1 | 218 | 813 | 596 | HIV-1 isolate OXSC167 from United Kingdom gag protein (gag) gene, partial cds | blastn | 21800 | 381 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 11498970 | 11498970 | PRJEB12982_P_NODE_17990_length_166_cov_0.871795_g17827_i0 | PRJEB12982 | 17990 | 166 | 0.871795 | 1.4471797 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 274 | 2.73e-69 | NTclustered | gi|51980229|gb|AY612637.1| | 11676 | g17827 | i0 | 96.386 | 112.975903614458 | 166 | 6 | 100 | 0 | 1 | 166 | 362 | 197 | HIV-1 isolate PT2695 from Portugal, complete genome | blastn | 18754 | 274 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 12464834 | 12464834 | PRJEB12982_P_NODE_3690_length_398_cov_11.593123_g3527_i0 | PRJEB12982 | 3690 | 398 | 11.593123 | 46.14062954 | root | 1 | Root_unresolved | Root_unresolved | 462 | 1.4899999999999998e-125 | NTclustered | gi|94960382|gb|CY010793.1| | 370129 | g3527 | i0 | 100 | 96.2211055276382 | 250 | 0 | 96 | 0 | 149 | 398 | 1946 | 2195 | Influenza A virus (A/WSN/1933 TS61(H1N1)) segment 3, complete sequence | blastn | 38296 | 462 | 1 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 13739138 | 13739138 | PRJEB12982_P_NODE_71_length_2209_cov_5.237963_g59_i0 | PRJEB12982 | 71 | 2209 | 5.237963 | 115.70660267 | root | 1 | Root_unresolved | Root_unresolved | 4052 | 0 | NTclustered | gi|2164728769|gb|OL831134.1| | 11320 | g59 | i0 | 99.819 | 99.4889090086012 | 2206 | 4 | 99 | 0 | 4 | 2209 | 1 | 2206 | Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 3 polymerase PA (PA) and PA-X protein (PA-X) genes, complete cds | blastn | 219771 | 4074 | 0.994599901816397 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 15323054 | 15323054 | PRJEB12982_P_NODE_13193_length_193_cov_0.951389_g13030_i0 | PRJEB12982 | 13193 | 193 | 0.951389 | 1.83618077 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 302 | 1.5e-77 | NTclustered | gi|2567180131|gb|OR246644.1| | 11676 | g13030 | i0 | 94.819 | 100 | 193 | 10 | 100 | 0 | 1 | 193 | 5553 | 5745 | HIV-1 isolate MRC004_Cluster26_size-14_count-3 from Belgium defective genome | blastn | 19300 | 302 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 15323223 | 15323223 | PRJEB12982_P_NODE_7233_length_270_cov_1.022624_g7070_i0 | PRJEB12982 | 7233 | 270 | 1.022624 | 2.7610848 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 374 | 4.6499999999999986e-99 | NTclustered | gi|1061889441|gb|KX693154.1| | 11676 | g7070 | i0 | 91.575 | 101.011111111111 | 273 | 20 | 100 | 3 | 1 | 270 | 747 | 1019 | HIV-1 isolate 2358-0-13 from China envelope glycoprotein (env) gene, complete cds | blastn | 27273 | 374 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 16597745 | 16597745 | PRJEB12982_P_NODE_17174_length_167_cov_0.864407_g17011_i0 | PRJEB12982 | 17174 | 167 | 0.864407 | 1.44355969 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 196 | 6.12e-46 | NTclustered | gi|1311871712|gb|MF988861.1| | 11676 | g17011 | i0 | 90.066 | 91.3892215568862 | 151 | 15 | 90 | 0 | 17 | 167 | 176 | 26 | HIV-1 isolate H4_1_18 from Spain envelope glycoprotein (env) gene, partial cds | blastn | 15262 | 196 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 16597802 | 16597802 | PRJEB12982_P_NODE_19914_length_163_cov_0.894737_g19751_i0 | PRJEB12982 | 19914 | 163 | 0.894737 | 1.45842131 | Sopidub virus | 3131684 | Viruses | Viruses | 134 | 4.72e-27 | NTclustered | gi|2717323145|gb|PP173985.1| | 3131684 | g19751 | i0 | 84.783 | 5.17177914110429 | 138 | 16 | 82 | 4 | 5 | 138 | 2212 | 2076 | MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence | blastn | 843 | 134 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Picobirnaviridae | Sopidub virus | |||
| 16597846 | 16597846 | PRJEB12982_P_NODE_4594_length_352_cov_1.178218_g4431_i0 | PRJEB12982 | 4594 | 352 | 1.178218 | 4.14732736 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 595 | 1.2299999999999994e-165 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g4431 | i0 | 97.159 | 3 | 352 | 10 | 100 | 0 | 1 | 352 | 6636 | 6987 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 1056 | 595 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 17872627 | 17872627 | PRJEB12982_P_NODE_21195_length_161_cov_0.910714_g21032_i0 | PRJEB12982 | 21195 | 161 | 0.910714 | 1.46624954 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 276 | 7.29e-70 | NTclustered | gi|1041501128|gb|KX129489.1| | 11676 | g21032 | i0 | 97.516 | 100 | 161 | 4 | 100 | 0 | 1 | 161 | 1957 | 2117 | HIV-1 isolate IC.790.L.E5 from USA envelope glycoprotein (env) gene, partial cds | blastn | 16100 | 276 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 17872647 | 17872647 | PRJEB12982_P_NODE_4315_length_364_cov_1.298413_g4152_i0 | PRJEB12982 | 4315 | 364 | 1.298413 | 4.72622332 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 645 | 1.2499999999999996e-180 | NTclustered | gi|1990739381|tpg|BK011179.1| | 2304617 | g4152 | i0 | 98.626 | 3.00824175824176 | 364 | 5 | 100 | 0 | 1 | 364 | 6060 | 5697 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | blastn | 1095 | 645 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 18837497 | 18837497 | PRJEB12982_P_NODE_315_length_1371_cov_15.780635_g258_i0 | PRJEB12982 | 315 | 1371 | 15.780635 | 216.35250585 | root | 1 | Root_unresolved | Root_unresolved | 2483 | 0 | NTclustered | gi|2164728776|gb|OL831137.1| | 11320 | g258 | i0 | 99.559 | 96.054704595186 | 1362 | 6 | 99 | 0 | 1 | 1362 | 1363 | 2 | Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 6 neuraminidase (NA) gene, complete cds | blastn | 131691 | 2494 | 0.995589414595028 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 20421561 | 20421561 | PRJEB12982_P_NODE_15757_length_174_cov_0.864000_g15594_i0 | PRJEB12982 | 15757 | 174 | 0.864 | 1.50336 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 252 | 1.34e-62 | NTclustered | gi|508083149|gb|KC699001.1| | 11676 | g15594 | i0 | 93.491 | 93.1724137931034 | 169 | 11 | 97 | 0 | 6 | 174 | 176 | 8 | HIV-1 isolate 1644 from France envelope glycoprotein (env) gene, complete cds | blastn | 16212 | 252 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 21387820 | 21387820 | PRJEB12982_P_NODE_17577_length_166_cov_0.871795_g17414_i0 | PRJEB12982 | 17577 | 166 | 0.871795 | 1.4471797 | Lentivirus | 11646 | Viruses | Viruses | 292 | 7.52e-75 | NTclustered | gi|63097046|gb|AY901572.1| | 11676 | g17414 | i0 | 98.193 | 99.9638554216867 | 166 | 3 | 100 | 0 | 1 | 166 | 201 | 36 | HIV-1 isolate 954 protease (pol) gene, partial cds | blastn | 16594 | 292 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 21697665 | 21697665 | PRJEB12982_P_NODE_18318_length_165_cov_0.879310_g18155_i0 | PRJEB12982 | 18318 | 165 | 0.87931 | 1.4508615 | Chrocagosk virus | 3129397 | Viruses | Viruses | 226 | 7.679999999999999e-55 | NTclustered | gi|2717317479|gb|PP171845.1| | 3129397 | g18155 | i0 | 97.037 | 79.0363636363636 | 135 | 3 | 81 | 1 | 32 | 165 | 326 | 192 | MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence | blastn | 13041 | 226 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Chrocagosk virus | |||||
| 22662615 | 22662615 | PRJEB12982_P_NODE_158_length_1758_cov_30.121123_g127_i0 | PRJEB12982 | 158 | 1758 | 30.121123 | 529.52934234 | Alphainfluenzavirus | 197911 | Viruses | Viruses | 3197 | 0 | NTclustered | gi|94960370|gb|CY010788.1| | 370129 | g127 | i0 | 99.828 | 98.773606370876 | 1741 | 2 | 99 | 1 | 1 | 1741 | 1740 | 1 | Influenza A virus (A/WSN/1933 TS61(H1N1)) segment 4, complete sequence | blastn | 173644 | 3208 | 0.996571072319202 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 22662643 | 22662643 | PRJEB12982_P_NODE_58_length_2325_cov_6.749121_g48_i0 | PRJEB12982 | 58 | 2325 | 6.749121 | 156.91706325 | root | 1 | Root_unresolved | Root_unresolved | 4266 | 0 | NTclustered | gi|2164748415|gb|OL831179.1| | 11320 | g48 | i0 | 99.828 | 99.4756989247312 | 2322 | 4 | 99 | 0 | 4 | 2325 | 1 | 2322 | Influenza A virus (A/India/H1N1-P2/2020(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds | blastn | 231281 | 4285 | 0.995565927654609 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae | ||
| 22973051 | 22973051 | PRJEB12982_P_NODE_9059_length_237_cov_1.047872_g8896_i0 | PRJEB12982 | 9059 | 237 | 1.047872 | 2.48345664 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 372 | 1.44e-98 | NTclustered | gi|1812398529|gb|MN524064.1| | 2304617 | g8896 | i0 | 95.299 | 2.9789029535865 | 234 | 11 | 99 | 0 | 3 | 236 | 1890 | 2123 | Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome | blastn | 706 | 372 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 22973063 | 22973063 | PRJEB12982_P_NODE_9899_length_225_cov_0.926136_g9736_i0 | PRJEB12982 | 9899 | 225 | 0.926136 | 2.083806 | Lentivirus humimdef1 | 3418650 | Viruses | Viruses | 388 | 1.34e-103 | NTclustered | gi|1243362010|gb|MF356742.1| | 11676 | g9736 | i0 | 97.778 | 99.1644444444444 | 225 | 5 | 100 | 0 | 1 | 225 | 953 | 1177 | HIV-1 isolate A585_clon1 from Argentina gag protein (gag) gene, partial cds | blastn | 22312 | 388 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 25211772 | 25211772 | PRJEB12982_P_NODE_60_length_2316_cov_8.075871_g50_i0 | PRJEB12982 | 60 | 2316 | 8.075871 | 187.03717236 | root | 1 | Root_unresolved | Root_unresolved | 4259 | 0 | NTclustered | gi|2164728766|gb|OL831133.1| | 11320 | g50 | i0 | 99.87 | 99.4365284974093 | 2315 | 3 | 99 | 0 | 1 | 2315 | 2315 | 1 | Influenza A virus (A/India/H1N1p2/2020(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds | blastn | 230295 | 4277 | 0.995791442599953 | Viruses | Orthornavirae | Negarnaviricota | Insthoviricetes | Articulavirales | Orthomyxoviridae | Alphainfluenzavirus | Alphainfluenzavirus influenzae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;