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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJEB12982" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
985697 985697 PRJEB12982_P_NODE_18881_length_164_cov_0.886957_g18718_i0 PRJEB12982 18881 164 0.886957 1.45460948 Naegleria 5761 Heterolobosea other_Eukaryota 298 1.59e-76   NTclustered gi|2289385106|gb|OP297026.1| 5762 g18718 i0 99.39 100 164 1 100 0 1 164 536 373 Naegleria gruberi strain 3HKMJS1 small subunit ribosomal RNA gene, partial sequence blastn 16400 298 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
3847252 3847252 PRJEB12982_P_NODE_5924_length_304_cov_1.600000_g5761_i0 PRJEB12982 5924 304 1.6 4.864 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 507 5.03e-139   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5761 i0 96.721 11.3223684210526 305 9 100 1 1 304 3917 3613 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3442 507 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3847299 3847299 PRJEB12982_P_NODE_9864_length_225_cov_1.318182_g9701_i0 PRJEB12982 9864 225 1.318182 2.9659095 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 169 1.9e-37   NTclustered gi|290979566|ref|XM_002672459.1| 5762 g9701 i0 87.671 58.2888888888889 146 17 64 1 5 149 1184 1329 Naegleria gruberi beta-tubulin (NAEGRDRAFT_55423), mRNA blastn 13115 169 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7673267 7673267 PRJEB12982_P_NODE_7627_length_262_cov_0.957746_g7464_i0 PRJEB12982 7627 262 0.957746 2.50929452 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 291 4.65e-74   NTclustered gi|290997092|ref|XM_002681070.1| 5762 g7464 i0 86.792 1.01145038167939 265 29 100 6 1 262 197 458 Naegleria gruberi nascent polypeptide-associated complex alpha subunit (NAEGRDRAFT_57099), mRNA blastn 265 291 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8948013 8948013 PRJEB12982_P_NODE_468_length_1163_cov_2.160682_g389_i0 PRJEB12982 468 1163 2.160682 25.12873166 Acrasis rosea 43695 Heterolobosea other_Eukaryota 1136 0   NTclustered gi|12083876|gb|AF190771.1|AF190771 43695 g389 i0 84.529 72.4677558039553 1157 169 99 9 11 1162 1204 53 Acrasis rosea elongation factor 1 alpha (tef1) gene, partial cds blastn 84280 1136 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
11498927 11498927 PRJEB12982_P_NODE_1550_length_628_cov_1.340242_g1403_i0 PRJEB12982 1550 628 1.340242 8.41671976 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 678 0   NTclustered gi|290974732|ref|XM_002670053.1| 5762 g1403 i0 86.452 95.7484076433121 620 82 99 2 1 619 525 1143 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55502), mRNA blastn 60130 678 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11498998 11498998 PRJEB12982_P_NODE_19470_length_163_cov_1.149123_g19307_i0 PRJEB12982 19470 163 1.149123 1.87307049 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 250 4.49e-62   NTclustered gi|290993541|ref|XM_002679346.1| 5762 g19307 i0 94.444 91.8159509202454 162 9 99 0 2 163 905 744 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36068), mRNA blastn 14966 250 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12774607 12774607 PRJEB12982_P_NODE_4011_length_379_cov_1.854545_g3848_i0 PRJEB12982 4011 379 1.854545 7.02872555 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 228 5.589999999999998e-55   NTclustered gi|290974050|ref|XM_002669714.1| 5762 g3848 i0 85.648 86.2612137203166 216 31 60 0 141 356 807 592 Naegleria gruberi polyubiquitin (NAEGRDRAFT_83338), partial mRNA blastn 32693 228 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13739135 13739135 PRJEB12982_P_NODE_6571_length_285_cov_1.694915_g6408_i0 PRJEB12982 6571 285 1.694915 4.83050775 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 521 1.6699999999999996e-143   NTclustered gi|89148133|gb|DQ388519.1| 373143 g6408 i0 99.649 76.2491228070175 285 1 100 0 1 285 2281 2565 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 21731 521 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
19146395 19146395 PRJEB12982_P_NODE_14776_length_181_cov_0.962121_g14613_i0 PRJEB12982 14776 181 0.962121 1.74143901 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 302 1.3800000000000001e-77   NTclustered gi|290991132|ref|XM_002678144.1| 5762 g14613 i0 96.685 11.1767955801105 181 6 100 0 1 181 766 946 Naegleria gruberi ribosomal protein L3 (NAEGRDRAFT_79448), mRNA blastn 2023 302 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20421710 20421710 PRJEB12982_P_NODE_5677_length_312_cov_0.969582_g5514_i0 PRJEB12982 5677 312 0.969582 3.02509584 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 224 5.839999999999998e-54   NTclustered gi|290993541|ref|XM_002679346.1| 5762 g5514 i0 81.55 62.7147435897436 271 50 87 0 1 271 862 592 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_36068), mRNA blastn 19567 224 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
21697738 21697738 PRJEB12982_P_NODE_4718_length_346_cov_1.202020_g4555_i0 PRJEB12982 4718 346 1.20202 4.1589892 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 579 1.2199999999999999e-160   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g4555 i0 97.085 8.70809248554913 343 10 99 0 1 343 1916 2258 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3013 579 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
22972816 22972816 PRJEB12982_P_NODE_11119_length_211_cov_1.425926_g10956_i0 PRJEB12982 11119 211 1.425926 3.00870386 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 313 7.7e-81   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g10956 i0 93.396 52.4502369668246 212 12 100 2 1 211 1148 1358 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 11067 313 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24246782 24246782 PRJEB12982_P_NODE_2040_length_545_cov_2.669355_g1881_i0 PRJEB12982 2040 545 2.669355 14.54798475 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 566 1.55e-156   NTclustered gi|2124407020|ref|XM_044688070.1| 51637 g1881 i0 86.667 90.5376146788991 510 68 94 0 28 537 1128 619 Naegleria lovaniensis uncharacterized protein (C9374_012317), partial mRNA blastn 49343 566 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;