RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB12982" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5123408 5123408 PRJEB12982_P_NODE_3605_length_404_cov_1.292958_g3442_i0 PRJEB12982 3605 404 1.292958 5.22355032 Heterostelium album 2086695 Evosea other_Eukaryota 272 2.73e-68   NTclustered gi|1160557950|ref|XM_020575808.1| 670386 g3442 i0 85.441 128.170792079208 261 38 65 0 2 262 1072 1332 Polysphondylium pallidum PN500 ubiquitin (ubqI), partial mRNA blastn 51781 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
21697582 21697582 PRJEB12982_P_NODE_12758_length_196_cov_1.387755_g12595_i0 PRJEB12982 12758 196 1.387755 2.7199998 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 246 7.25e-61   NTclustered gi|167859711|gb|EU273435.1| 1346289 g12595 i0 89.286 96.5663265306122 196 21 100 0 1 196 357 162 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 18927 246 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;