RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB12982" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB12982 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17872543 17872543 PRJEB12982_P_NODE_16675_length_167_cov_1.872881_g16512_i0 PRJEB12982 16675 167 1.872881 3.12771127 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g16512 i0 100 31.3233532934132 167 0 100 0 1 167 1158 992 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 5231 309 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
21697660 21697660 PRJEB12982_P_NODE_17938_length_166_cov_0.871795_g17775_i0 PRJEB12982 17938 166 0.871795 1.4471797 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 307 2.69e-79   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g17775 i0 100 3.01807228915663 166 0 100 0 1 166 132 297 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 501 307 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;