RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB12982" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJEB12982 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13739098 13739098 PRJEB12982_P_NODE_13531_length_190_cov_1.092199_g13368_i0 PRJEB12982 13531 190 1.092199 2.0751781 Oscillatoriales 1150 Bacteria Bacteria 351 1.4399999999999997e-92   NTclustered gi|1026287096|gb|KU218870.1| 1211 g13368 i0 100 103 190 0 100 0 1 190 190 1 Uncultured cyanobacterium clone MnSV_DE08834E10 16S ribosomal RNA gene, partial sequence blastn 19570 351 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         uncultured cyanobacterium
20421584 20421584 PRJEB12982_P_NODE_16857_length_167_cov_0.864407_g16694_i0 PRJEB12982 16857 167 0.864407 1.44355969 Synechococcus sp. CBW1107 2789857 Bacteria Bacteria 60.2 8.37e-5   NTclustered gi|2638498304|emb|OY986430.1| 2789857 g16694 i0 97.143 0.209580838323353 35 1 21 0 101 135 2168481 2168447 Synechococcus sp. CBW1107 isolate KAC_114 genome assembly, chromosome: 1 blastn 35 60.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. CBW1107

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;