RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJEB12366" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 10 ✖

bioproject 1

  • PRJEB12366 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20745 20745 PRJEB12366_P_NODE_1441_length_718_cov_27.983895_g1295_i0 PRJEB12366 1441 718 27.983895 200.9243661 Nilaparvata lugens C virus 1577072 Viruses Viruses 99 9.09e-16   NTclustered gi|726973360|gb|KM270560.1| 1577072 g1295 i0 91.781 1.79805013927577 73 2 10 3 627 696 9048 9119 Nilaparvata lugens C virus, complete genome blastn 1291 99 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Nilaparvata lugens C virus
20825 20825 PRJEB12366_S_NODE_1621_length_192_cov_6.949045_g1613_i0 PRJEB12366 1621 192 6.949045 13.3421664 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.005   NTclustered gi|2057099742|tpg|BK038287.1| 2832643 g1613 i0 100 0.348958333333333 29 0 15 0 164 192 17627 17655 MAG TPA_asm: Caudoviricetes sp. isolate ctSy120, partial genome blastn 67 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
2570695 2570695 PRJEB12366_S_NODE_323_length_272_cov_3.924051_g315_i0 PRJEB12366 323 272 3.924051 10.67341872 Caudoviricetes sp. 2832643 Viruses Viruses 54.7 0.007   NTclustered gi|2052989461|tpg|BK030804.1| 2832643 g315 i0 100 0.533088235294118 29 0 11 0 244 272 42 14 MAG TPA_asm: Caudoviricetes sp. isolate ctoES23, partial genome blastn 145 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5123205 5123205 PRJEB12366_S_NODE_1225_length_205_cov_64.341176_g1217_i0 PRJEB12366 1225 205 64.341176 131.8994108 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 2.97e-5   NTclustered gi|2914779711|gb|OR222261.1| 2832643 g1217 i0 100 16.8390243902439 33 0 16 0 173 205 48 16 MAG: Caudoviricetes sp. isolate MSP0706 genomic sequence blastn 3452 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
7673015 7673015 PRJEB12366_S_NODE_727_length_225_cov_13.484211_g719_i0 PRJEB12366 727 225 13.484211 30.33947475 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.02   NTclustered gi|2914889788|gb|OR222639.1| 2832643 g719 i0 100 0.124444444444444 28 0 12 0 198 225 59725 59752 MAG: Caudoviricetes sp. isolate MSP0290 genomic sequence blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10223575 10223575 PRJEB12366_S_NODE_2309_length_175_cov_3.814286_g2301_i0 PRJEB12366 2309 175 3.814286 6.6750005 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.015   NTclustered gi|2914801528|gb|OR221207.1| 2832643 g2301 i0 100 0.16 28 0 16 0 148 175 40047 40074 MAG: Caudoviricetes sp. isolate MSP1915 genomic sequence blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16597616 16597616 PRJEB12366_S_NODE_634_length_231_cov_11.255102_g626_i0 PRJEB12366 634 231 11.255102 25.99928562 Caudoviricetes sp. 2832643 Viruses Viruses 58.4 4.44e-4   NTclustered gi|2914929465|gb|OR221553.1| 2832643 g626 i0 100 14.4891774891775 31 0 13 0 1 31 20 50 MAG: Caudoviricetes sp. isolate MSP1526 genomic sequence blastn 3347 58.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21697531 21697531 PRJEB12366_S_NODE_178_length_334_cov_116.826087_g170_i0 PRJEB12366 178 334 116.826087 390.19913058 Caudoviricetes sp. 2832643 Viruses Viruses 106 2.38e-18   NTclustered gi|2914981896|gb|OR222105.1| 2832643 g170 i0 96.875 19.2395209580838 64 1 19 1 1 64 12 74 MAG: Caudoviricetes sp. isolate MSP0005 genomic sequence blastn 6426 106 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21697532 21697532 PRJEB12366_S_NODE_618_length_232_cov_18.873096_g610_i0 PRJEB12366 618 232 18.873096 43.78558272 Caudoviricetes sp. 2832643 Viruses Viruses 63.9 9.58e-6   NTclustered gi|2057153112|tpg|BK058538.1| 2832643 g610 i0 91.489 14.1163793103448 47 3 20 1 185 231 93288 93333 MAG TPA_asm: Caudoviricetes sp. isolate ctoh412, partial genome blastn 3275 63.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24246608 24246608 PRJEB12366_P_NODE_7900_length_278_cov_39.534979_g7710_i0 PRJEB12366 7900 278 39.534979 109.90724162 Mitovirus sp. 2587224 Viruses Viruses 174 5.23e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g7710 i0 94.643 3.37769784172662 112 6 40 0 163 274 112 1 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;