RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB12366" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12366 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3536260 3536260 PRJEB12366_S_NODE_2063_length_180_cov_3.606897_g2055_i0 PRJEB12366 2063 180 3.606897 6.4924146 Ascomycota 4890 Fungi Fungi 331 1.75e-86   NTclustered gi|913748860|ref|NG_042637.1| 4924 g2055 i0 100 107.45 179 0 99 0 1 179 2727 2549 Scheffersomyces stipitis NRRL Y-7124 28S rRNA, partial sequence; from TYPE material blastn 19341 331 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Scheffersomyces Scheffersomyces stipitis
3536262 3536262 PRJEB12366_S_NODE_303_length_279_cov_2.131148_g295_i0 PRJEB12366 303 279 2.131148 5.94590292 Candida 5475 Fungi Fungi 459 1.3000000000000002e-124   NTclustered gi|1919719729|ref|XR_005013740.1| 5480 g295 i0 100 108.043010752688 248 0 89 0 2 249 253 6 Candida parapsilosis 25S ribosomal RNA (25S rRNA), rRNA blastn 30144 459 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
3846994 3846994 PRJEB12366_P_NODE_3044_length_494_cov_1.729847_g2858_i0 PRJEB12366 3044 494 1.729847 8.54544418 Wickerhamomyces anomalus 4927 Fungi Fungi 228 7.469999999999997e-55   NTclustered gi|1102237324|ref|XM_019181995.1| 683960 g2858 i0 80.511 19.7894736842105 313 47 62 12 155 460 306 1 Wickerhamomyces anomalus NRRL Y-366-8 histone H4 (WICANDRAFT_32681), partial mRNA blastn 9776 228 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces anomalus
4813499 4813499 PRJEB12366_P_NODE_17784_length_164_cov_1.162791_g17594_i0 PRJEB12366 17784 164 1.162791 1.90697724 Didymellaceae 683158 Fungi Fungi 298 1.59e-76   NTclustered gi|2289385083|gb|CP095310.1| 5454 g17594 i0 99.39 94.2926829268293 164 1 100 0 1 164 54321 54484 Ascochyta rabiei isolate Me14 mitochondrion, complete genome blastn 15464 298 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Ascochyta Ascochyta rabiei
4813506 4813506 PRJEB12366_S_NODE_144_length_368_cov_14.102102_g136_i0 PRJEB12366 144 368 14.102102 51.89573536 Dothideomycetes 147541 Fungi Fungi 667 0   NTclustered gi|66805490|gb|DQ008146.1| 29917 g136 i0 100 98.0978260869565 361 0 98 0 1 361 57 417 Cladosporium cladosporioides strain CBS 109501 28S large subunit ribosomal RNA gene, partial sequence blastn 36100 667 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
5123194 5123194 PRJEB12366_P_NODE_8305_length_270_cov_3.280851_g8115_i0 PRJEB12366 8305 270 3.280851 8.8582977 Debaryomyces fabryi 58627 Fungi Fungi 102 2.42e-17   NTclustered gi|998529950|ref|XM_015611823.1| 58627 g8115 i0 94.03 1.28518518518519 67 4 25 0 204 270 935 869 Debaryomyces fabryi uncharacterized protein (AC631_02994), partial mRNA blastn 347 102 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
6088751 6088751 PRJEB12366_P_NODE_1125_length_809_cov_14.562016_g995_i0 PRJEB12366 1125 809 14.562016 117.80670944 Dothideomycetes 147541 Fungi Fungi 1275 0   NTclustered gi|31415588|gb|AY293791.1| 73001 g995 i0 95.173 99.3213844252163 808 37 99 1 1 806 1287 480 Phoma herbarum strain ATCC 12569 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 80351 1286 0.99144634525661 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Phoma Phoma herbarum
6088754 6088754 PRJEB12366_P_NODE_14425_length_188_cov_4.725490_g14235_i0 PRJEB12366 14425 188 4.72549 8.8839212 Ascomycota 4890 Fungi Fungi 119 1.57e-22   NTclustered gi|891579155|ref|XR_001203012.1| 483514 g14235 i0 82.707 77.7127659574468 133 23 71 0 1 133 3590 3722 Schizosaccharomyces octosporus yFS286 28S ribosomal RNA (SOCG_16326), rRNA blastn 14610 119 1 Eukaryota Opisthokonta Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces Schizosaccharomyces octosporus
6088771 6088771 PRJEB12366_S_NODE_3145_length_163_cov_9.289062_g3137_i0 PRJEB12366 3145 163 9.289062 15.14117106 Ascomycota 4890 Fungi Fungi 250 4.49e-62   NTclustered gi|2619697492|gb|OR793848.1| 5480 g3137 i0 99.281 84.6932515337423 139 0 85 1 26 163 699 561 Candida parapsilosis isolate VMCDC01 small subunit ribosomal RNA gene, partial sequence blastn 13805 250 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
6398848 6398848 PRJEB12366_P_NODE_10226_length_236_cov_1.791045_g10036_i0 PRJEB12366 10226 236 1.791045 4.2268662 Saccharomycodes ludwigii 36035 Fungi Fungi 119 2.0600000000000001e-22   NTclustered gi|2185207882|ref|XM_046080922.1| 36035 g10036 i0 81.818 1.23305084745763 143 24 60 2 4 145 142 1 Saccharomycodes ludwigii uncharacterized protein (SCDLUD_001892), partial mRNA blastn 291 119 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycodales Saccharomycodaceae Saccharomycodes Saccharomycodes ludwigii
7363341 7363341 PRJEB12366_S_NODE_606_length_233_cov_204.212121_g598_i0 PRJEB12366 606 233 204.212121 475.81424193 Candida 5475 Fungi Fungi 213 9.04e-51   NTclustered gi|269912765|emb|FN554242.1| 5480 g598 i0 100 61.0815450643777 115 0 49 0 89 203 606 720 Candida parapsilosis NTS1, 5S rRNA gene, NTS2 and ETS1, strain XT1 blastn 14232 213 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
7363342 7363342 PRJEB12366_S_NODE_726_length_225_cov_22.336842_g718_i0 PRJEB12366 726 225 22.336842 50.2578945 Fungi 4751 Fungi Fungi 350 6.34e-92   NTclustered gi|1818821828|gb|MT153889.1| 5480 g718 i0 100 84 189 0 84 0 37 225 209 397 Candida parapsilosis isolate 4Y226 large subunit ribosomal RNA gene, partial sequence blastn 18900 350 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
7673012 7673012 PRJEB12366_P_NODE_8867_length_259_cov_2.741071_g8677_i0 PRJEB12366 8867 259 2.741071 7.09937389 Debaryomyces fabryi 58627 Fungi Fungi 102 2.31e-17   NTclustered gi|998529950|ref|XM_015611823.1| 58627 g8677 i0 94.03 1.33976833976834 67 4 26 0 193 259 935 869 Debaryomyces fabryi uncharacterized protein (AC631_02994), partial mRNA blastn 347 102 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
8638741 8638741 PRJEB12366_P_NODE_13967_length_192_cov_1.783439_g13777_i0 PRJEB12366 13967 192 1.783439 3.42420288 Debaryomycetaceae 766764 Fungi Fungi 126 9.6e-25   NTclustered gi|2325087202|ref|XM_051759133.1| 497109 g13777 i0 82.639 6.453125 144 23 74 2 2 144 379 521 Candida pseudojiufengensis ARF1 (KGF55_004250), partial mRNA blastn 1239 126 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida pseudojiufengensis
10223518 10223518 PRJEB12366_P_NODE_14469_length_188_cov_1.823529_g14279_i0 PRJEB12366 14469 188 1.823529 3.42823452 Exophiala oligosperma 215243 Fungi Fungi 62.1 2.68e-5   NTclustered gi|1022875123|ref|XM_016405565.1| 215243 g14279 i0 95 1.71808510638298 40 0 21 2 83 121 2495 2533 Exophiala oligosperma uncharacterized protein (PV06_04646), mRNA blastn 323 62.1 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala oligosperma
10223531 10223531 PRJEB12366_P_NODE_17729_length_164_cov_1.410853_g17539_i0 PRJEB12366 17729 164 1.410853 2.31379892 Debaryomyces fabryi 58627 Fungi Fungi 56.5 0.001   NTclustered gi|998531002|ref|XM_015611336.1| 58627 g17539 i0 90.476 1.70731707317073 42 4 26 0 5 46 1807 1848 Debaryomyces fabryi Peroxisomal hydratase-dehydrogenase-epimerase (AC631_02506), partial mRNA blastn 280 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
11188976 11188976 PRJEB12366_P_NODE_12189_length_210_cov_119.542857_g11999_i0 PRJEB12366 12189 210 119.542857 251.0399997 root 1 Root_unresolved Root_unresolved 388 1.24e-103   NTclustered gi|1389182097|gb|CP029160.1| 4932 g11999 i0 100 114.157142857143 210 0 100 0 1 210 3881781 3881572 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 23973 388 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
11188984 11188984 PRJEB12366_P_NODE_19449_length_154_cov_2.016807_g19259_i0 PRJEB12366 19449 154 2.016807 3.10588278 Meyerozyma 766728 Fungi Fungi 110 7.39e-20   NTclustered gi|2589337584|gb|OP629464.1| 4929 g19259 i0 81.481 7.61688311688312 135 23 87 2 1 134 1587 1720 Meyerozyma guilliermondii strain ATCC 6260 hypothetical protein (PGUG_01133) gene, complete cds blastn 1173 110 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
13739080 13739080 PRJEB12366_P_NODE_9851_length_242_cov_1.106280_g9661_i0 PRJEB12366 9851 242 1.10628 2.6771976 Colletotrichum 5455 Fungi Fungi 54.7 0.006   NTclustered gi|2163298840|ref|XM_045409859.1| 474922 g9661 i0 100 0.359504132231405 29 0 12 0 162 190 535 563 Colletotrichum gloeosporioides uncharacterized protein (GCG54_00009922), partial mRNA blastn 87 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum gloeosporioides
14048861 14048861 PRJEB12366_P_NODE_15212_length_182_cov_1.748299_g15022_i0 PRJEB12366 15212 182 1.748299 3.18190418 Fusarium tjaetaba 1567544 Fungi Fungi 69.4 1.54e-7   NTclustered gi|1929765541|ref|XM_037352438.1| 1567544 g15022 i0 86.885 1.82967032967033 61 8 34 0 26 86 431 371 Fusarium tjaetaba large-conductance mechanosensitive channel protein (FTJAE_5883), partial mRNA blastn 333 69.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium tjaetaba
15013497 15013497 PRJEB12366_S_NODE_1852_length_185_cov_2.446667_g1844_i0 PRJEB12366 1852 185 2.446667 4.52633395 Eukaryota 2759 Fungi Fungi 274 3.1e-69   NTclustered gi|4512045|gb|AF114470.1|AF114470 5476 g1844 i0 100 80 148 0 80 0 38 185 213 66 Candida albicans 18S ribosomal RNA gene, complete sequence blastn 14800 274 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans
16288358 16288358 PRJEB12366_S_NODE_4233_length_151_cov_2.267241_g4225_i0 PRJEB12366 4233 151 2.267241 3.42353391 Fungi 4751 Fungi Fungi 279 5.19e-71   NTclustered gi|2612872|gb|AF010303.1| 63354 g4225 i0 100 100 151 0 100 0 1 151 39 189 Sclerotium sp. BSC-97 18S ribosomal RNA gene, partial sequence blastn 15100 279 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae   Sclerotiniaceae sp. BSC-97
17563499 17563499 PRJEB12366_P_NODE_7274_length_293_cov_17.395349_g7084_i0 PRJEB12366 7274 293 17.395349 50.96837257 Ascomycota 4890 Fungi Fungi 542 1.32e-149   NTclustered gi|1134949146|gb|KX237674.1| 4909 g7084 i0 100 100 293 0 100 0 1 293 289 581 Pichia kudriavzevii isolate YNCA9005 large subunit ribosomal RNA gene, partial sequence blastn 29300 542 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kudriavzevii
17563510 17563510 PRJEB12366_S_NODE_4074_length_153_cov_4.101695_g4066_i0 PRJEB12366 4074 153 4.101695 6.27559335 Eukaryota 2759 Fungi Fungi 222 9.029999999999999e-54   NTclustered gi|2532687033|gb|OR243761.1| 29917 g4066 i0 93.377 97.359477124183 151 9 99 1 1 151 3973 4122 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14896 222 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
20112229 20112229 PRJEB12366_S_NODE_276_length_290_cov_37.462745_g268_i0 PRJEB12366 276 290 37.462745 108.6419605 Eukaryota 2759 Fungi Fungi 536 6.079999999999999e-148   NTclustered gi|514829572|gb|KC771883.1| 4929 g268 i0 100 88.3172413793103 290 0 100 0 1 290 319 30 Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence blastn 25612 536 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
21387800 21387800 PRJEB12366_S_NODE_77_length_442_cov_5.243243_g69_i0 PRJEB12366 77 442 5.243243 23.17513406 Candida 5475 Fungi Fungi 811 0   NTclustered gi|1919719729|ref|XR_005013740.1| 5480 g69 i0 99.774 99.3619909502262 442 1 100 0 1 442 1914 1473 Candida parapsilosis 25S ribosomal RNA (25S rRNA), rRNA blastn 43918 811 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
22662597 22662597 PRJEB12366_S_NODE_138_length_375_cov_33.258824_g130_i0 PRJEB12366 138 375 33.258824 124.72059 Ascomycota 4890 Fungi Fungi 606 6.069999999999998e-169   NTclustered gi|1430900541|gb|MH636026.1| 5480 g130 i0 100 87.4746666666667 328 0 87 0 1 328 11 338 Candida parapsilosis isolate 1 voucher PH02 large subunit ribosomal RNA gene, partial sequence blastn 32803 606 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
23938006 23938006 PRJEB12366_P_NODE_6319_length_322_cov_1.811847_g6129_i0 PRJEB12366 6319 322 1.811847 5.83414734 Schizosaccharomyces 4895 Fungi Fungi 222 2.18e-53   NTclustered gi|2524387879|emb|OY101113.1| 4897 g6129 i0 80.986 26.972049689441 284 51 88 3 25 308 2986913 2987193 Schizosaccharomyces japonicus genome assembly, chromosome: 3 blastn 8685 222 1 Eukaryota Opisthokonta Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces Schizosaccharomyces japonicus
23938009 23938009 PRJEB12366_S_NODE_1499_length_197_cov_2.882716_g1491_i0 PRJEB12366 1499 197 2.882716 5.67895052 Fungi 4751 Fungi Fungi 364 1.929999999999999e-96   NTclustered gi|2217006246|gb|ON155334.1| 34409 g1491 i0 100 99.9644670050761 197 0 100 0 1 197 834 638 Colletotrichum sp. isolate PT2731 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19693 364 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum sp.
24246590 24246590 PRJEB12366_P_NODE_4980_length_373_cov_2.248521_g4790_i0 PRJEB12366 4980 373 2.248521 8.38698333 Spathaspora passalidarum 340170 Fungi Fungi 250 1.17e-61   NTclustered gi|598072100|ref|XM_007376817.1| 619300 g4790 i0 80.415 77.8927613941019 337 58 89 8 32 364 57 389 Spathaspora passalidarum NRRL Y-27907 40S ribosomal protein S14-B (SPAPADRAFT_62713), mRNA blastn 29054 250 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Spathaspora Spathaspora passalidarum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;