contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJEB12366" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20755 | 20755 | PRJEB12366_P_NODE_16301_length_174_cov_1.410072_g16111_i0 | PRJEB12366 | 16301 | 174 | 1.410072 | 2.45352528 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 305 | 1.02e-78 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g16111 | i0 | 98.276 | 166.431034482759 | 174 | 3 | 100 | 0 | 1 | 174 | 653981 | 654154 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 28959 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 2260935 | 2260935 | PRJEB12366_P_NODE_8662_length_263_cov_2.105263_g8472_i0 | PRJEB12366 | 8662 | 263 | 2.105263 | 5.53684169 | Luteolibacter | 518753 | Bacteria | Bacteria | 289 | 1.68e-73 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g8472 | i0 | 87.121 | 412.346007604563 | 264 | 23 | 99 | 9 | 1 | 260 | 2216641 | 2216385 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 108447 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 | |
| 2570690 | 2570690 | PRJEB12366_P_NODE_9803_length_242_cov_2.444444_g9613_i0 | PRJEB12366 | 9803 | 242 | 2.444444 | 5.91555448 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 324 | 4.18e-84 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g9613 | i0 | 91.286 | 201.946280991736 | 241 | 15 | 99 | 5 | 2 | 241 | 26599 | 26364 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 48871 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 3536251 | 3536251 | PRJEB12366_P_NODE_17043_length_168_cov_3.353383_g16853_i0 | PRJEB12366 | 17043 | 168 | 3.353383 | 5.63368344 | Planctomycetia | 203683 | Bacteria | Bacteria | 294 | 2.12e-75 | NTclustered | gi|908859|emb|X81960.1| | 41672 | g16853 | i0 | 98.214 | 117.458333333333 | 168 | 3 | 100 | 0 | 1 | 168 | 1479 | 1312 | Isophaera sp. partial 16S rRNA gene (Schlesner 657) | blastn | 19733 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera sp. | |
| 5123138 | 5123138 | PRJEB12366_P_NODE_16245_length_174_cov_2.223022_g16055_i0 | PRJEB12366 | 16245 | 174 | 2.223022 | 3.86805828 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 278 | 2.22e-70 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g16055 | i0 | 96.45 | 131.568965517241 | 169 | 4 | 97 | 2 | 6 | 174 | 17102 | 17268 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 22893 | 278 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 5123189 | 5123189 | PRJEB12366_P_NODE_7265_length_294_cov_1.536680_g7075_i0 | PRJEB12366 | 7265 | 294 | 1.53668 | 4.5178392 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 320 | 6.77e-83 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g7075 | i0 | 86.486 | 123.309523809524 | 296 | 34 | 100 | 5 | 1 | 294 | 258 | 549 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 36253 | 320 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 7363339 | 7363339 | PRJEB12366_S_NODE_3246_length_162_cov_1.976378_g3238_i0 | PRJEB12366 | 3246 | 162 | 1.976378 | 3.20173236 | root | 1 | Root_unresolved | Root_unresolved | 222 | 9.709999999999999e-54 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g3238 | i0 | 93.421 | 60.9567901234568 | 152 | 7 | 93 | 3 | 9 | 158 | 2002474 | 2002324 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 9875 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 7672945 | 7672945 | PRJEB12366_P_NODE_13327_length_198_cov_1.803681_g13137_i0 | PRJEB12366 | 13327 | 198 | 1.803681 | 3.57128838 | uncultured Phycisphaeraceae bacterium | 904980 | Bacteria | Bacteria | 364 | 1.9399999999999995e-96 | NTclustered | gi|2259485739|emb|OW952296.1| | 904980 | g13137 | i0 | 100 | 99.2676767676768 | 197 | 0 | 99 | 0 | 2 | 198 | 38 | 234 | uncultured Phycisphaeraceae bacterium DNA containing 16S-23S intergenic spacer region, clone 43 | blastn | 19655 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | uncultured Phycisphaeraceae bacterium | ||
| 7672995 | 7672995 | PRJEB12366_P_NODE_5547_length_349_cov_1.993631_g5357_i0 | PRJEB12366 | 5547 | 349 | 1.993631 | 6.95777219 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 283 | 1.07e-71 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g5357 | i0 | 81.714 | 95.3467048710602 | 350 | 54 | 100 | 8 | 1 | 349 | 2749806 | 2749466 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 33276 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10223534 | 10223534 | PRJEB12366_P_NODE_19469_length_154_cov_1.680672_g19279_i0 | PRJEB12366 | 19469 | 154 | 1.680672 | 2.58823488 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 257 | 2.5e-64 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g19279 | i0 | 96.753 | 106.142857142857 | 154 | 5 | 100 | 0 | 1 | 154 | 1251332 | 1251485 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 16346 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 10223550 | 10223550 | PRJEB12366_P_NODE_449_length_1259_cov_5.051471_g341_i1 | PRJEB12366 | 449 | 1259 | 5.051471 | 63.59801989 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 1563 | 0 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g341 | i1 | 90.29 | 150.033359809373 | 1205 | 101 | 95 | 13 | 1 | 1196 | 1600472 | 1599275 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 188892 | 1563 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 11498804 | 11498804 | PRJEB12366_P_NODE_410_length_1302_cov_4.819258_g341_i0 | PRJEB12366 | 410 | 1302 | 4.819258 | 62.74673916 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 1644 | 0 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g341 | i0 | 89.558 | 151.218125960061 | 1312 | 115 | 99 | 18 | 1 | 1299 | 1600472 | 1599170 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 196886 | 1644 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 14048916 | 14048916 | PRJEB12366_P_NODE_6712_length_310_cov_0.938182_g6522_i0 | PRJEB12366 | 6712 | 310 | 0.938182 | 2.9083642 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 377 | 4.21e-100 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g6522 | i0 | 88.71 | 137.916129032258 | 310 | 34 | 100 | 1 | 1 | 310 | 174091 | 174399 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 42754 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 19146226 | 19146226 | PRJEB12366_P_NODE_10416_length_233_cov_2.348485_g10226_i0 | PRJEB12366 | 10416 | 233 | 2.348485 | 5.47197005 | uncultured Planctomycetia bacterium | 411917 | Bacteria | Bacteria | 375 | 1.0899999999999998e-99 | NTclustered | gi|151349787|gb|EF662496.1| | 411917 | g10226 | i0 | 95.726 | 103.824034334764 | 234 | 8 | 100 | 2 | 1 | 233 | 29 | 261 | Uncultured Planctomycetacia bacterium clone GASP-MA1S3_F03 16S ribosomal RNA gene, partial sequence | blastn | 24191 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | uncultured Planctomycetia bacterium | ||||
| 20421439 | 20421439 | PRJEB12366_P_NODE_4357_length_402_cov_2.482289_g4167_i0 | PRJEB12366 | 4357 | 402 | 2.482289 | 9.97880178 | Singulisphaera sp. Ch08 | 3120278 | Bacteria | Bacteria | 427 | 5.48e-115 | NTclustered | gi|2732846650|gb|CP155447.1| | 3120278 | g4167 | i0 | 87.335 | 95.1442786069652 | 379 | 40 | 94 | 7 | 2 | 377 | 7728950 | 7728577 | Singulisphaera sp. Ch08 chromosome, complete genome | blastn | 38248 | 427 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera sp. Ch08 | |
| 20421468 | 20421468 | PRJEB12366_S_NODE_2157_length_178_cov_3.475524_g2149_i0 | PRJEB12366 | 2157 | 178 | 3.475524 | 6.18643272 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 191 | 3.06e-44 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g2149 | i0 | 88.75 | 10.3370786516854 | 160 | 12 | 88 | 6 | 1 | 157 | 2002958 | 2003114 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 1840 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 22972794 | 22972794 | PRJEB12366_S_NODE_1119_length_208_cov_2.358382_g1111_i0 | PRJEB12366 | 1119 | 208 | 2.358382 | 4.90543456 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 161 | 2.8999999999999997e-35 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g1111 | i0 | 83.06 | 24.1057692307692 | 183 | 26 | 87 | 5 | 3 | 182 | 2002030 | 2001850 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 5014 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24246617 | 24246617 | PRJEB12366_S_NODE_220_length_313_cov_3.535971_g212_i0 | PRJEB12366 | 220 | 313 | 3.535971 | 11.06758923 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 459 | 1.48e-124 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g212 | i0 | 93.038 | 580.798722044728 | 316 | 19 | 100 | 3 | 1 | 313 | 558698 | 558383 | Gemmata sp. SH-PL17, complete genome | blastn | 181790 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 25211718 | 25211718 | PRJEB12366_P_NODE_18460_length_160_cov_0.952000_g18270_i0 | PRJEB12366 | 18460 | 160 | 0.952 | 1.5232 | Gemmata | 113 | Bacteria | Bacteria | 226 | 7.389999999999999e-55 | NTclustered | gi|12583965|gb|AF245369.1|AF245369 | 114 | g18270 | i0 | 92.405 | 24.4 | 158 | 12 | 99 | 0 | 3 | 160 | 264 | 421 | Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence | blastn | 3904 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;