RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB12296" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12296 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25772709 25772709 PRJEB12296_S_NODE_1763_length_307_cov_4.735294_g1731_i0 PRJEB12296 1763 307 4.735294 14.53735258 Lobosporangium transversale 64571 Fungi Fungi 161 4.56e-35   NTclustered gi|1227131044|ref|XM_022022878.1| 64571 g1731 i0 80.476 26.5276872964169 210 41 68 0 28 237 267 476 Lobosporangium transversale 40S ribosomal protein S13 (BCR41DRAFT_346424), mRNA blastn 8144 161 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
25908926 25908926 PRJEB12296_S_NODE_3132_length_252_cov_1.829493_g3100_i0 PRJEB12296 3132 252 1.829493 4.61032236 Calcarisporiella thermophila 911321 Fungi Fungi 78.7 3.77e-10   NTclustered gi|2837854098|ref|XM_069392337.1| 911321 g3100 i0 91.228 0.226190476190476 57 5 23 0 31 87 131 75 Calcarisporiella thermophila uncharacterized protein (VTP21DRAFT_2171), partial mRNA blastn 57 78.7 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
25908951 25908951 PRJEB12296_S_NODE_4004_length_229_cov_2.721649_g3972_i0 PRJEB12296 4004 229 2.721649 6.23257621 Mucor mucedo 29922 Fungi Fungi 52.8 0.02   NTclustered gi|2324051988|ref|XM_051607308.1| 29922 g3972 i0 100 0.122270742358079 28 0 12 0 49 76 2838 2811 Mucor mucedo clustered mitochondria-domain-containing protein (EV154DRAFT_602647), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
26151301 26151301 PRJEB12296_S_NODE_3509_length_241_cov_1.587379_g3477_i0 PRJEB12296 3509 241 1.587379 3.82558339 Mucoraceae 34489 Fungi Fungi 440 3.959999999999999e-119   NTclustered gi|1473258043|gb|MH870987.1| 64648 g3477 i0 99.585 99.3153526970954 241 1 100 0 1 241 243 3 Mucor saturninus culture CBS:974.68 strain CBS 974.68 large subunit ribosomal RNA gene, partial sequence blastn 23935 440 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor saturninus
26151351 26151351 PRJEB12296_S_NODE_9237_length_176_cov_40.723404_g9205_i0 PRJEB12296 9237 176 40.723404 71.67319104 Fungi 4751 Fungi Fungi 62.1 2.47e-5   NTclustered gi|1603705284|gb|MK704515.1| 4846 g9205 i0 100 19.1420454545455 33 0 19 0 1 33 1249 1217 Rhizopus stolonifer isolate HST24 large subunit ribosomal RNA gene, partial sequence blastn 3369 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;