RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJEB12296" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 1 ✖

bioproject 1

  • PRJEB12296 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26316839 26316839 PRJEB12296_S_NODE_1439_length_328_cov_9.133106_g1407_i0 PRJEB12296 1439 328 9.133106 29.95658768 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.031   NTclustered gi|9964314|ref|NC_002520.1| 28321 g1407 i0 94.286 0.106707317073171 35 1 10 1 193 226 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;