RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB12237" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB12237 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4813487 4813487 PRJEB12237_P_NODE_9984_length_169_cov_1.171642_g9788_i0 PRJEB12237 9984 169 1.171642 1.98007498 Entomophthorales 4857 Fungi Fungi 313 5.859999999999999e-81   NTclustered gi|22535854|gb|AF296757.1| 164418 g9788 i0 100 77.0887573964497 169 0 100 0 1 169 429 261 Conidiobolus obscurus isolate 560 small subunit ribosomal RNA gene, partial sequence blastn 13028 313 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus obscurus
20112166 20112166 PRJEB12237_P_NODE_3236_length_373_cov_1.952663_g3040_i0 PRJEB12237 3236 373 1.952663 7.28343299 Eukaryota 2759 Fungi Fungi 52.8 0.035   NTclustered gi|2572089157|gb|OR502659.1| 34485 g3040 i0 100 0.46112600536193 28 0 8 0 121 148 666 693 Entomophthora muscae strain KVL 14-117 large subunit ribosomal RNA gene, partial sequence blastn 172 52.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
24246459 24246459 PRJEB12237_P_NODE_11400_length_156_cov_0.991736_g11204_i0 PRJEB12237 11400 156 0.991736 1.54710816 Conidiobolus pseudapiculatus 423463 Fungi Fungi 289 9e-74   NTclustered gi|145307831|gb|EF392398.1| 423463 g11204 i0 100 76.9807692307692 156 0 100 0 1 156 175 20 Conidiobolus pseudapiculatus strain ARSEF 1662 28S ribosomal RNA gene, partial sequence blastn 12009 289 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus pseudapiculatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;